Information for 7-GAGGGAGCCCTAA (Motif 5)

A T C G T C G A C T A G C T A G T C A G C G T A T C A G T A G C T A G C A G T C A G C T G T C A C T G A
Reverse Opposite:
G A C T C A G T T C G A T A C G A T C G A C T G A G T C C G A T A G T C G A T C A G T C A G C T A T G C
p-value:1e-11
log p-value:-2.567e+01
Information Content per bp:1.665
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif171.8
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets58.3 +/- 20.0bp
Average Position of motif in Background48.0 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAGCCCTAA-
TTGGGGGCGCCCCTAG
 A C G T A C G T A T C G T C G A C T A G C T A G T C A G C G T A T C A G T A G C T A G C A G T C A G C T G T C A C T G A A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAGGGAGCCCTAA
--CGGAGC-----
 A T C G T C G A C T A G C T A G T C A G C G T A T C A G T A G C T A G C A G T C A G C T G T C A C T G A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAGCCCTAA
GGGCGGGAAGG----
 A C G T A C G T A T C G T C G A C T A G C T A G T C A G C G T A T C A G T A G C T A G C A G T C A G C T G T C A C T G A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GAGGGAGCCCTAA
GRTGMTRGAGCC----
 A C G T A C G T A C G T A T C G T C G A C T A G C T A G T C A G C G T A T C A G T A G C T A G C A G T C A G C T G T C A C T G A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGGGAGCCCTAA---
GGGTGTGCCCAAAAGG
 A T C G T C G A C T A G C T A G T C A G C G T A T C A G T A G C T A G C A G T C A G C T G T C A C T G A A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAGCCCTAA
GGGCGGGACC-----
 A C G T A C G T A T C G T C G A C T A G C T A G T C A G C G T A T C A G T A G C T A G C A G T C A G C T G T C A C T G A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAGGGAGCCCTAA
--GGGAGGACNG-
 A T C G T C G A C T A G C T A G T C A G C G T A T C A G T A G C T A G C A G T C A G C T G T C A C T G A
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GAGGGAGCCCTAA
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C G T A T C G T C G A C T A G C T A G T C A G C G T A T C A G T A G C T A G C A G T C A G C T G T C A C T G A
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAGCCCTAA
GGCGGGAARN----
 A C G T A T C G T C G A C T A G C T A G T C A G C G T A T C A G T A G C T A G C A G T C A G C T G T C A C T G A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGGGAGCCCTAA
-AGCGCGCC----
 A T C G T C G A C T A G C T A G T C A G C G T A T C A G T A G C T A G C A G T C A G C T G T C A C T G A
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T