Information for 9-TCAAATATTT (Motif 11)

A C G T T A G C G T C A T G C A C G T A G A C T C G T A C G A T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A G C A T C T G A C G A T A C G T A C G T A T C G C G T A
p-value:1e-7
log p-value:-1.730e+01
Information Content per bp:1.764
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif138.0
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets52.9 +/- 29.0bp
Average Position of motif in Background52.6 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0009.1_Bsx/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TCAAATATTT-----
NTNAGNTAATTACCTN
 A C G T A C G T T A G C G T C A T G C A C G T A G A C T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G

PH0021.1_Dlx2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCAAATATTT-----
CTGANNTAATTATNNN
 A C G T A C G T T A G C G T C A T G C A C G T A G A C T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G A C T C A T G C T G A C T A G T A C G G A C T C G T A C G T A C G A T A C G T C T G A G A C T G A C T A G T C A G T C

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCAAATATTT
---AATAATT
 A C G T T A G C G T C A T G C A C G T A G A C T C G T A C G A T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCAAATATTT--
NNCNNAACAATTNT
 A C G T A C G T A C G T T A G C G T C A T G C A C G T A G A C T C G T A C G A T A C G T A C G T A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PH0103.1_Meox1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCAAATATTT-----
CTGAGGTAATTACCNC
 A C G T A C G T T A G C G T C A T G C A C G T A G A C T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

PHOX2A/MA0713.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCAAATATTT-
TAATTTAATTA
 A C G T T A G C G T C A T G C A C G T A G A C T C G T A C G A T A C G T A C G T A C G T
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCAAATATTT-
TAATTTAATTA
 A C G T T A G C G T C A T G C A C G T A G A C T C G T A C G A T A C G T A C G T A C G T
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PH0020.1_Dlx1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCAAATATTT---
CTGAGGTAATTAAT
 A C G T A C G T T A G C G T C A T G C A C G T A G A C T C G T A C G A T A C G T A C G T A C G T A C G T A C G T
A G T C A G C T C T A G T G C A C T A G C T A G G A C T T C G A C G T A C G A T A C G T C T G A C G T A A G C T

PB0177.1_Sox7_2/Jaspar

Match Rank:9
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TCAAATATTT-----
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T C A T G C A C G T A G A C T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

PH0132.1_Pax6/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCAAATATTT-----
GNNAATTAATTAATCA
 A C G T A C G T T A G C G T C A T G C A C G T A G A C T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A