Information for 10-GGAGAGAKCA (Motif 12)

C T A G A T C G C G T A A T C G T G C A T A C G T C G A C A T G A G T C C T G A
Reverse Opposite:
G A C T T C A G G T A C A G C T A T G C A C G T T A G C C G A T A T G C G A T C
p-value:1e-22
log p-value:-5.154e+01
Information Content per bp:1.650
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.85%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets53.8 +/- 27.6bp
Average Position of motif in Background57.1 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGAKCA
CGGAGC-----
 A C G T C T A G A T C G C G T A A T C G T G C A T A C G T C G A C A T G A G T C C T G A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGAKCA-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T C T A G A T C G C G T A A T C G T G C A T A C G T C G A C A T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGAKCA
TTGAGTGSTT-
 A C G T C T A G A T C G C G T A A T C G T G C A T A C G T C G A C A T G A G T C C T G A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGAGAGAKCA----
GACAGAGATATCAGTGT
 A C G T A C G T A C G T C T A G A T C G C G T A A T C G T G C A T A C G T C G A C A T G A G T C C T G A A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGAGAGAKCA
--AGRGGTCA
 C T A G A T C G C G T A A T C G T G C A T A C G T C G A C A T G A G T C C T G A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGAGAGAKCA
TGGGGA-----
 A C G T C T A G A T C G C G T A A T C G T G C A T A C G T C G A C A T G A G T C C T G A
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAGAGAKCA
GGGCGGGAAGG
 A C G T C T A G A T C G C G T A A T C G T G C A T A C G T C G A C A T G A G T C C T G A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGAGAGAKCA
TTGACCGAGAATTCC
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G C G T A A T C G T G C A T A C G T C G A C A T G A G T C C T G A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGAKCA
CTTGAGTGGCT-
 A C G T A C G T C T A G A T C G C G T A A T C G T G C A T A C G T C G A C A T G A G T C C T G A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGAGAKCA
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G C G T A A T C G T G C A T A C G T C G A C A T G A G T C C T G A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T