Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-6 | -1.407e+01 | 0.0003 | 21.0 | 2.65% | 350.5 | 0.74% | motif file (matrix) |
svg |
2 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-5 | -1.343e+01 | 0.0003 | 106.0 | 13.40% | 3994.1 | 8.39% | motif file (matrix) |
svg |
3 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-5 | -1.315e+01 | 0.0003 | 94.0 | 11.88% | 3441.3 | 7.23% | motif file (matrix) |
svg |
4 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-5 | -1.302e+01 | 0.0003 | 30.0 | 3.79% | 679.0 | 1.43% | motif file (matrix) |
svg |
5 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.270e+01 | 0.0003 | 34.0 | 4.30% | 839.3 | 1.76% | motif file (matrix) |
svg |
6 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-4 | -1.099e+01 | 0.0010 | 28.0 | 3.54% | 680.6 | 1.43% | motif file (matrix) |
svg |
7 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -1.077e+01 | 0.0011 | 26.0 | 3.29% | 615.0 | 1.29% | motif file (matrix) |
svg |
8 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.070e+01 | 0.0011 | 42.0 | 5.31% | 1255.1 | 2.64% | motif file (matrix) |
svg |
9 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.056e+01 | 0.0011 | 60.0 | 7.59% | 2057.2 | 4.32% | motif file (matrix) |
svg |
10 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.007e+01 | 0.0015 | 49.0 | 6.19% | 1596.5 | 3.35% | motif file (matrix) |
svg |
11 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.004e+01 | 0.0015 | 56.0 | 7.08% | 1913.1 | 4.02% | motif file (matrix) |
svg |
12 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-4 | -9.355e+00 | 0.0026 | 23.0 | 2.91% | 556.0 | 1.17% | motif file (matrix) |
svg |
13 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.830e+00 | 0.0041 | 70.0 | 8.85% | 2671.7 | 5.61% | motif file (matrix) |
svg |
14 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-3 | -8.582e+00 | 0.0049 | 25.0 | 3.16% | 665.5 | 1.40% | motif file (matrix) |
svg |
15 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.522e+00 | 0.0049 | 18.0 | 2.28% | 403.6 | 0.85% | motif file (matrix) |
svg |
16 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -8.125e+00 | 0.0067 | 21.0 | 2.65% | 529.0 | 1.11% | motif file (matrix) |
svg |
17 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-3 | -7.909e+00 | 0.0079 | 44.0 | 5.56% | 1522.8 | 3.20% | motif file (matrix) |
svg |
18 |
| YY1(Zf)/Promoter/Homer | 1e-3 | -7.787e+00 | 0.0084 | 15.0 | 1.90% | 321.2 | 0.67% | motif file (matrix) |
svg |
19 |
| E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer | 1e-3 | -7.525e+00 | 0.0103 | 22.0 | 2.78% | 594.4 | 1.25% | motif file (matrix) |
svg |
20 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.108e+00 | 0.0149 | 39.0 | 4.93% | 1353.0 | 2.84% | motif file (matrix) |
svg |
21 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-2 | -6.729e+00 | 0.0207 | 87.0 | 11.00% | 3755.4 | 7.89% | motif file (matrix) |
svg |
22 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -6.502e+00 | 0.0248 | 68.0 | 8.60% | 2813.3 | 5.91% | motif file (matrix) |
svg |
23 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.299e+00 | 0.0291 | 13.0 | 1.64% | 299.4 | 0.63% | motif file (matrix) |
svg |
24 |
| E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer | 1e-2 | -5.914e+00 | 0.0410 | 39.0 | 4.93% | 1449.2 | 3.04% | motif file (matrix) |
svg |
25 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.597e+00 | 0.0540 | 23.0 | 2.91% | 739.3 | 1.55% | motif file (matrix) |
svg |
26 |
| BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-2 | -5.360e+00 | 0.0658 | 59.0 | 7.46% | 2493.7 | 5.24% | motif file (matrix) |
svg |
27 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.136e+00 | 0.0793 | 28.0 | 3.54% | 997.6 | 2.10% | motif file (matrix) |
svg |
28 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-2 | -5.003e+00 | 0.0873 | 13.0 | 1.64% | 350.7 | 0.74% | motif file (matrix) |
svg |
29 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -4.851e+00 | 0.0982 | 27.0 | 3.41% | 973.3 | 2.04% | motif file (matrix) |
svg |
30 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -4.828e+00 | 0.0982 | 12.0 | 1.52% | 318.1 | 0.67% | motif file (matrix) |
svg |
31 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -4.632e+00 | 0.1143 | 11.0 | 1.39% | 287.8 | 0.60% | motif file (matrix) |
svg |