Information for 1-GAGACCTCGG (Motif 6)

C T A G T C G A A T C G T C G A A T G C G A T C A C G T A T G C A C T G T A C G
Reverse Opposite:
A T G C T G A C A T C G T G C A C T A G A T C G A G C T A T G C A G C T G A T C
p-value:1e-10
log p-value:-2.428e+01
Information Content per bp:1.634
Number of Target Sequences with motif142.0
Percentage of Target Sequences with motif17.95%
Number of Background Sequences with motif4855.1
Percentage of Background Sequences with motif10.20%
Average Position of motif in Targets46.4 +/- 26.1bp
Average Position of motif in Background49.6 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GAGACCTCGG----
CAGGCCNNGGCCNN
 C T A G T C G A A T C G T C G A A T G C G A T C A C G T A T G C A C T G T A C G A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGACCTCGG
-AGGCCTNG-
 C T A G T C G A A T C G T C G A A T G C G A T C A C G T A T G C A C T G T A C G
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGACCTCGG
-AGGCCTAG-
 C T A G T C G A A T C G T C G A A T G C G A T C A C G T A T G C A C T G T A C G
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GAGACCTCGG-
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A C G T A C G T C T A G T C G A A T C G T C G A A T G C G A T C A C G T A T G C A C T G T A C G A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGACCTCGG
AAGACCCYYN
 C T A G T C G A A T C G T C G A A T G C G A T C A C G T A T G C A C T G T A C G
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GAGACCTCGG
GGTTAGAGACCT---
 A C G T A C G T A C G T A C G T A C G T C T A G T C G A A T C G T C G A A T G C G A T C A C G T A T G C A C T G T A C G
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAGACCTCGG----
CATAAGACCACCATTAC
 A C G T A C G T A C G T C T A G T C G A A T C G T C G A A T G C G A T C A C G T A T G C A C T G T A C G A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAGACCTCGG
-TGACCYCT-
 C T A G T C G A A T C G T C G A A T G C G A T C A C G T A T G C A C T G T A C G
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GAGACCTCGG---
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T C T A G T C G A A T C G T C G A A T G C G A T C A C G T A T G C A C T G T A C G A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGACCTCGG
CTGACCTTTG
 C T A G T C G A A T C G T C G A A T G C G A T C A C G T A T G C A C T G T A C G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G