Information for 1-GGAGCGTCTCTGGCGC (Motif 4)

C T A G A T C G C G T A A C T G G T A C A T C G A C G T A G T C A G C T A G T C A C G T A C T G A C T G A G T C A T C G A G T C
Reverse Opposite:
C T A G A T G C A C T G A G T C A G T C C G T A A C T G C T G A A C T G C G T A A T G C A C T G A G T C C G A T A T G C A G T C
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.865
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 26.5bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GGAGCGTCTCTGGCGC------
-----NNNNTTGGCGCCGANNN
 C T A G A T C G C G T A A C T G G T A C A T C G A C G T A G T C A G C T A G T C A C G T A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

E2F1/MA0024.3/Jaspar

Match Rank:2
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GGAGCGTCTCTGGCGC----
--------TTTGGCGCCAAA
 C T A G A T C G C G T A A C T G G T A C A T C G A C G T A G T C A G C T A G T C A C G T A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GGAGCGTCTCTGGCGC------
-----NNNNTTGGCGCCGANNN
 C T A G A T C G C G T A A C T G G T A C A T C G A C G T A G T C A G C T A G T C A C G T A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GGAGCGTCTCTGGCGC-
--------NTTGGCANN
 C T A G A T C G C G T A A C T G G T A C A T C G A C G T A G T C A G C T A G T C A C G T A C T G A C T G A G T C A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGAGCGTCTCTGGCGC
GGNGCGNCTGTTNNN-
 C T A G A T C G C G T A A C T G G T A C A T C G A C G T A G T C A G C T A G T C A C G T A C T G A C T G A G T C A T C G A G T C
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GGAGCGTCTCTGGCGC
------GGTCTGGCAT
 C T A G A T C G C G T A A C T G G T A C A T C G A C G T A G T C A G C T A G T C A C G T A C T G A C T G A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.51
Offset:9
Orientation:forward strand
Alignment:GGAGCGTCTCTGGCGC
---------TTGGCA-
 C T A G A T C G C G T A A C T G G T A C A T C G A C G T A G T C A G C T A G T C A C G T A C T G A C T G A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GGAGCGTCTCTGGCGC
----CGCCTCAGGCA-
 C T A G A T C G C G T A A C T G G T A C A T C G A C G T A G T C A G C T A G T C A C G T A C T G A C T G A G T C A T C G A G T C
A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GGAGCGTCTCTGGCGC
---VBSYGTCTGG---
 C T A G A T C G C G T A A C T G G T A C A T C G A C G T A G T C A G C T A G T C A C G T A C T G A C T G A G T C A T C G A G T C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GGAGCGTCTCTGGCGC
----AGCCTCAGGCA-
 C T A G A T C G C G T A A C T G G T A C A T C G A C G T A G T C A G C T A G T C A C G T A C T G A C T G A G T C A T C G A G T C
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T