Information for 3-CAGGGGCTCCATC (Motif 3)

A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T G C A G T C G T C A A C G T A G T C
Reverse Opposite:
A C T G G T C A A C G T A C T G A T C G C G T A A C T G A G T C A G T C A G T C G T A C A C G T A C T G
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 30.1bp
Average Position of motif in Background53.3 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CAGGGGCTCCATC---
----GGCTCYAKCAYC
 A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T G C A G T C G T C A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGGCTCCATC--
NNNGGGGCGCCCCCNN
 A C G T A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T G C A G T C G T C A A C G T A G T C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGGCTCCATC
NRRGGGTCTT----
 A C G T A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T G C A G T C G T C A A C G T A G T C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAGGGGCTCCATC
-----GCTCCG--
 A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T G C A G T C G T C A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGGCTCCATC
SDGCAGGTGCNS----
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T G C A G T C G T C A A C G T A G T C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGGCTCCATC
NNCAGGTGTN-----
 A C G T A C G T A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T G C A G T C G T C A A C G T A G T C
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAGGGGCTCCATC
----NGCTN----
 A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T G C A G T C G T C A A C G T A G T C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGGCTCCATC
NNCAGGTGCG-----
 A C G T A C G T A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T G C A G T C G T C A A C G T A G T C
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGGCTCCATC
GCTCGGSCTC----
 A C G T A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T G C A G T C G T C A A C G T A G T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAGGGGCTCCATC
ATCCACAGGTGCGAAAA-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T G C A G T C G T C A A C G T A G T C
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T