Information for 9-CTCGAGACTA (Motif 22)

A G T C C G A T T G A C C T A G C G T A A C T G C G T A A T G C A G C T C G T A
Reverse Opposite:
A C G T C T G A A T C G A C G T A G T C A C G T A G T C A C T G C G T A A C T G
p-value:1e-7
log p-value:-1.731e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.6 +/- 16.7bp
Average Position of motif in Background69.5 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTCGAGACTA--
TTGACCGAGAATTCC
 A C G T A C G T A C G T A G T C C G A T T G A C C T A G C G T A A C T G C G T A A T G C A G C T C G T A A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTCGAGACTA--
GNNACCGAGAATNNN
 A C G T A C G T A C G T A G T C C G A T T G A C C T A G C G T A A C T G C G T A A T G C A G C T C G T A A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTCGAGACTA--
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A G T C C G A T T G A C C T A G C G T A A C T G C G T A A T G C A G C T C G T A A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Mitf/MA0620.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCGAGACTA
NCACGTGACN-
 A C G T A G T C C G A T T G A C C T A G C G T A A C T G C G T A A T G C A G C T C G T A
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:5
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------CTCGAGACTA
NAGNTCTCGCGAGAN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T T G A C C T A G C G T A A C T G C G T A A T G C A G C T C G T A
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCGAGACTA
--BCAGACWA
 A G T C C G A T T G A C C T A G C G T A A C T G C G T A A T G C A G C T C G T A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCGAGACTA----
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A G T C C G A T T G A C C T A G C G T A A C T G C G T A A T G C A G C T C G T A A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

Tcfl5/MA0632.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCGAGACTA
GGCACGTGCC--
 A C G T A C G T A G T C C G A T T G A C C T A G C G T A A C T G C G T A A T G C A G C T C G T A
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

GFX(?)/Promoter/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCGAGACTA
TCTCGCGAGAAT-
 A C G T A C G T A C G T A G T C C G A T T G A C C T A G C G T A A C T G C G T A A T G C A G C T C G T A
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTCGAGACTA
RTCATGTGAC--
 A C G T A C G T A G T C C G A T T G A C C T A G C G T A A C T G C G T A A T G C A G C T C G T A
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T