Information for 2-CGCCCTCTGTGGC (Motif 2)

G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G C G A T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A G T C C T G A A C T G C G T A A C T G A C T G C T A G G T A C A C T G
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.904
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.6 +/- 18.0bp
Average Position of motif in Background35.5 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CGCCCTCTGTGGC--
----GTCTGTGGTTT
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G C G A T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CGCCCTCTGTGGC-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G C G A T A C T G A C T G A G T C A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGCCCTCTGTGGC-
--TCCCCTGGGGAC
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G C G A T A C T G A C T G A G T C A C G T
A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGCCCTCTGTGGC
GACCCCCCGCTGTG--
 A C G T A C G T A C G T G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G C G A T A C T G A C T G A G T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCCCTCTGTGGC
-GCCATCTGTT--
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G C G A T A C T G A C T G A G T C
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGCCCTCTGTGGC---
----NNHTGTGGTTWN
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGCCCTCTGTGGC
-ACCATCTGTT--
 G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G C G A T A C T G A C T G A G T C
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCTCTGTGGC
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G C G A T A C T G A C T G A G T C
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CGCCCTCTGTGGC
GCCMCGCCCMCY-----
 A C G T A C G T A C G T A C G T G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G C G A T A C T G A C T G A G T C
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CGCCCTCTGTGGC
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T G T A C A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G C G A T A C T G A C T G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T