Information for 2-GGCACCTGACAGCGCC (Motif 3)

A C T G A C T G G T A C C G T A A G T C A G T C A C G T A T C G C G T A A G T C C T G A A C T G A T G C A T C G A T G C A G T C
Reverse Opposite:
C T A G A T C G T A G C A T C G A G T C A G C T C T A G A C G T A T G C G T C A A C T G A C T G A C G T C A T G A G T C A G T C
p-value:1e-13
log p-value:-3.120e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 25.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SNAI2/MA0745.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCACCTGACAGCGCC
-NCACCTGTN------
 A C T G A C T G G T A C C G T A A G T C A G T C A C G T A T C G C G T A A G T C C T G A A C T G A T G C A T C G A T G C A G T C
A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGCACCTGACAGCGCC
-----TTGACAGC---
 A C T G A C T G G T A C C G T A A G T C A G T C A C G T A T C G C G T A A G T C C T G A A C T G A T G C A T C G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCACCTGACAGCGCC
TACACCTGTC------
 A C T G A C T G G T A C C G T A A G T C A G T C A C G T A T C G C G T A A G T C C T G A A C T G A T G C A T C G A T G C A G T C
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCACCTGACAGCGCC
NNCACCTGNN------
 A C T G A C T G G T A C C G T A A G T C A G T C A C G T A T C G C G T A A G T C C T G A A C T G A T G C A T C G A T G C A G T C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCACCTGACAGCGCC
TGGCACGTGCCA-----
 A C G T A C T G A C T G G T A C C G T A A G T C A G T C A C G T A T C G C G T A A G T C C T G A A C T G A T G C A T C G A T G C A G T C
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGCACCTGACAGCGCC
GWAAYHTGAKMC----
 A C T G A C T G G T A C C G T A A G T C A G T C A C G T A T C G C G T A A G T C C T G A A C T G A T G C A T C G A T G C A G T C
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCACCTGACAGCGCC
TGACACCTGTCA-----
 A C G T A C T G A C T G G T A C C G T A A G T C A G T C A C G T A T C G C G T A A G T C C T G A A C T G A T G C A T C G A T G C A G T C
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGCACCTGACAGCGCC
----VBTGWCAGCB--
 A C T G A C T G G T A C C G T A A G T C A G T C A C G T A T C G C G T A A G T C C T G A A C T G A T G C A T C G A T G C A G T C
A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCACCTGACAGCGCC
TGGCACGTGCCG-----
 A C G T A C T G A C T G G T A C C G T A A G T C A G T C A C G T A T C G C G T A A G T C C T G A A C T G A T G C A T C G A T G C A G T C
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCACCTGACAGCGCC
SNGCACCTGCHS-----
 A C G T A C T G A C T G G T A C C G T A A G T C A G T C A C G T A T C G C G T A A G T C C T G A A C T G A T G C A T C G A T G C A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T