Information for 5-GCCACATGCT (Motif 12)

A C T G T A G C G T A C G T C A T A G C G C T A A G C T C A T G G A T C G C A T
Reverse Opposite:
C G T A C T A G G T A C T C G A C G A T A T C G C A G T C A T G A T C G T G A C
p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.653
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif11.81%
Number of Background Sequences with motif2987.2
Percentage of Background Sequences with motif6.23%
Average Position of motif in Targets50.8 +/- 23.3bp
Average Position of motif in Background50.3 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAX::MYC/MA0059.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GCCACATGCT-
ACCACGTGCTC
 A C T G T A G C G T A C G T C A T A G C G C T A A G C T C A T G G A T C G C A T A C G T
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C

Mycn/MA0104.3/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCCACATGCT
GCCACGTG--
 A C T G T A G C G T A C G T C A T A G C G C T A A G C T C A T G G A T C G C A T
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GCCACATGCT
GGTCACATGAC
 A C G T A C T G T A G C G T A C G T C A T A G C G C T A A G C T C A T G G A T C G C A T
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GCCACATGCT--
ACCACATCCTGT
 A C T G T A G C G T A C G T C A T A G C G C T A A G C T C A T G G A T C G C A T A C G T A C G T
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:5
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GCCACATGCT
--CACGTGNT
 A C T G T A G C G T A C G T C A T A G C G C T A A G C T C A T G G A T C G C A T
A C G T A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCCACATGCT-
SNGCACCTGCHS
 A C G T A C T G T A G C G T A C G T C A T A G C G C T A A G C T C A T G G A T C G C A T A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCCACATGCT
GTCACATGAY
 A C T G T A G C G T A C G T C A T A G C G C T A A G C T C A T G G A T C G C A T
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCCACATGCT
NNCCACGTGG-
 A C G T A C T G T A G C G T A C G T C A T A G C G C T A A G C T C A T G G A T C G C A T
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T

HEY2/MA0649.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCCACATGCT
GACACGTGCC
 A C T G T A G C G T A C G T C A T A G C G C T A A G C T C A T G G A T C G C A T
C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCCACATGCT
NNACCACGTGGT
 A C G T A C G T A C T G T A G C G T A C G T C A T A G C G C T A A G C T C A T G G A T C G C A T
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T