p-value: | 1e-11 |
log p-value: | -2.661e+01 |
Information Content per bp: | 1.934 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.79% |
Number of Background Sequences with motif | 0.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 65.4 +/- 21.1bp |
Average Position of motif in Background | 66.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CAAAGAACTCATG --AAGCACTTAA- |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CAAAGAACTCATG-- TACTAAGTACTTAAATG |
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PB0166.1_Sox12_2/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CAAAGAACTCATG AAACAGACAAAGGAAT---- |
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PB0071.1_Sox4_1/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CAAAGAACTCATG AGAAGAACAAAGGACTA--- |
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Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAAAGAACTCATG ACAAAGGNBCCT-- |
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PH0112.1_Nkx2-3/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CAAAGAACTCATG- CNTTAAGTACTTAANG |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CAAAGAACTCATG ATAAGAACAAAGGACTA--- |
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NFE2/MA0841.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CAAAGAACTCATG --CATGACTCATC |
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JDP2/MA0655.1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CAAAGAACTCATG ---ATGACTCAT- |
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PB0083.1_Tcf7_1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CAAAGAACTCATG TATAGATCAAAGGAAAA--- |
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