Information for 5-GWTGAKTTCCAAGACW (Motif 7)

A T C G C G A T C G A T C T A G C G T A A C T G A G C T A C G T A T G C A T G C G T C A C T G A T C A G C G T A A G T C C G T A
Reverse Opposite:
C G A T C T A G A C G T A G T C A G C T A C G T A T C G T A C G C G T A C T G A G T A C A C G T A G T C C G T A C G T A A T G C
p-value:1e-12
log p-value:-2.862e+01
Information Content per bp:1.755
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.8 +/- 20.5bp
Average Position of motif in Background49.2 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GWTGAKTTCCAAGACW
TNNNATGATTTCNNCNN--
 A C G T A C G T A C G T A T C G C G A T C G A T C T A G C G T A A C T G A G C T A C G T A T G C A T G C G T C A C T G A T C A G C G T A A G T C C G T A
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GWTGAKTTCCAAGACW
------TTGCAACATN
 A T C G C G A T C G A T C T A G C G T A A C T G A G C T A C G T A T G C A T G C G T C A C T G A T C A G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GWTGAKTTCCAAGACW
----ATTTCCAAGAA-
 A T C G C G A T C G A T C T A G C G T A A C T G A G C T A C G T A T G C A T G C G T C A C T G A T C A G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GWTGAKTTCCAAGACW--
---CAATTGCAAAAATAT
 A T C G C G A T C G A T C T A G C G T A A C T G A G C T A C G T A T G C A T G C G T C A C T G A T C A G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GWTGAKTTCCAAGACW
----AGGTGHCAGACA
 A T C G C G A T C G A T C T A G C G T A A C T G A G C T A C G T A T G C A T G C G T C A C T G A T C A G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GWTGAKTTCCAAGACW-
----AGGTGNCAGACAG
 A T C G C G A T C G A T C T A G C G T A A C T G A G C T A C G T A T G C A T G C G T C A C T G A T C A G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GWTGAKTTCCAAGACW
---CGGTTTCAAA---
 A T C G C G A T C G A T C T A G C G T A A C T G A G C T A C G T A T G C A T G C G T C A C T G A T C A G C G T A A G T C C G T A
A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GWTGAKTTCCAAGACW
-TTGACTTTT------
 A T C G C G A T C G A T C T A G C G T A A C T G A G C T A C G T A T G C A T G C G T C A C T G A T C A G C G T A A G T C C G T A
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GWTGAKTTCCAAGACW---
----ATTTGCATAACAATG
 A T C G C G A T C G A T C T A G C G T A A C T G A G C T A C G T A T G C A T G C G T C A C T G A T C A G C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

CEBPA/MA0102.3/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GWTGAKTTCCAAGACW
-----ATTGCACAATA
 A T C G C G A T C G A T C T A G C G T A A C T G A G C T A C G T A T G C A T G C G T C A C T G A T C A G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A