Information for 4-CCTTACCTATACTTTA (Motif 6)

A G T C G T A C A G C T G A C T G T C A G T A C G T A C A C G T C G T A A C G T C T G A A T G C C G A T C G A T A C G T T C G A
Reverse Opposite:
A C G T T G C A C G T A C G T A T A C G G A C T C G T A G C A T C G T A A C T G C A T G C A G T C T G A C T G A C A T G C T A G
p-value:1e-12
log p-value:-2.897e+01
Information Content per bp:1.699
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets65.0 +/- 17.6bp
Average Position of motif in Background65.5 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCTTACCTATACTTTA
--TGACCTTTNCNT--
 A G T C G T A C A G C T G A C T G T C A G T A C G T A C A C G T C G T A A C G T C T G A A T G C C G A T C G A T A C G T T C G A
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCTTACCTATACTTTA
NTCNTCCCCTATNNGNN-
 A C G T A C G T A G T C G T A C A G C T G A C T G T C A G T A C G T A C A C G T C G T A A C G T C T G A A T G C C G A T C G A T A C G T T C G A
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A A C G T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCTTACCTATACTTTA---
--TGACCTTTANTTGACCT
 A G T C G T A C A G C T G A C T G T C A G T A C G T A C A C G T C G T A A C G T C T G A A T G C C G A T C G A T A C G T T C G A A C G T A C G T A C G T
A C G T A C G T G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCTTACCTATACTTTA
NNACTTACCTN-------
 A C G T A C G T A G T C G T A C A G C T G A C T G T C A G T A C G T A C A C G T C G T A A C G T C T G A A T G C C G A T C G A T A C G T T C G A
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCTTACCTATACTTTA---
--TGACCTTTGCATGACCT
 A G T C G T A C A G C T G A C T G T C A G T A C G T A C A C G T C G T A A C G T C T G A A T G C C G A T C G A T A C G T T C G A A C G T A C G T A C G T
A C G T A C G T G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCTTACCTATACTTTA
---AAGATATCCTT--
 A G T C G T A C A G C T G A C T G T C A G T A C G T A C A C G T C G T A A C G T C T G A A T G C C G A T C G A T A C G T T C G A
A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCTTACCTATACTTTA
TTCTTATCTGT------
 A C G T A G T C G T A C A G C T G A C T G T C A G T A C G T A C A C G T C G T A A C G T C T G A A T G C C G A T C G A T A C G T T C G A
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CCTTACCTATACTTTA
NNNNTGACCTTTNNNN--
 A C G T A C G T A G T C G T A C A G C T G A C T G T C A G T A C G T A C A C G T C G T A A C G T C T G A A T G C C G A T C G A T A C G T T C G A
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:9
Score:0.49
Offset:7
Orientation:forward strand
Alignment:CCTTACCTATACTTTA--
-------TATTGTTTATT
 A G T C G T A C A G C T G A C T G T C A G T A C G T A C A C G T C G T A A C G T C T G A A T G C C G A T C G A T A C G T T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

POU4F2/MA0683.1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CCTTACCTATACTTTA
CTCATTAATTATGCAT--
 A C G T A C G T A G T C G T A C A G C T G A C T G T C A G T A C G T A C A C G T C G T A A C G T C T G A A T G C C G A T C G A T A C G T T C G A
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T A C G T A C G T