Information for 5-TTGGCCCAAK (Motif 26)

A C G T A C G T A C T G A C T G A T G C A G T C A G T C C G T A C G T A C A G T
Reverse Opposite:
G T C A A C G T A C G T A C T G A C T G A T C G A G T C A G T C C G T A C G T A
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif28.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets50.0 +/- 15.5bp
Average Position of motif in Background41.5 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTGGCCCAAK
TTGGCA----
 A C G T A C G T A C T G A C T G A T G C A G T C A G T C C G T A C G T A C A G T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCCCAAK
NTTGGCANN--
 A C G T A C G T A C G T A C T G A C T G A T G C A G T C A G T C C G T A C G T A C A G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTGGCCCAAK
GTGGGCCCCA-
 A C G T A C G T A C G T A C T G A C T G A T G C A G T C A G T C C G T A C G T A C A G T
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTGGCCCAAK---
---AGCCAATCGG
 A C G T A C G T A C T G A C T G A T G C A G T C A G T C C G T A C G T A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTGGCCCAAK---
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C A G T C A G T C C G T A C G T A C A G T A C G T A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCCCAAK
NNTTGGCANN--
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C A G T C A G T C C G T A C G T A C A G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTGGCCCAAK---------
-TGGACCAATCAGCACTCT
 A C G T A C G T A C T G A C T G A T G C A G T C A G T C C G T A C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTGGCCCAAK--
ACTAGCCAATCA
 A C G T A C G T A C T G A C T G A T G C A G T C A G T C C G T A C G T A C A G T A C G T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGGCCCAAK-
-TGACCTARTT
 A C G T A C G T A C T G A C T G A T G C A G T C A G T C C G T A C G T A C A G T A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGGCCCAAK
GTTGCGCAAT
 A C G T A C G T A C T G A C T G A T G C A G T C A G T C C G T A C G T A C A G T
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T