Information for 7-CAGTWGCAAAGVA (Motif 20)

A G T C C G T A A C T G C G A T C G T A A C T G T G A C G T C A T C G A C G T A C T A G T C A G C T G A
Reverse Opposite:
G A C T A G T C A G T C A C G T A G C T A C G T A C T G G T A C G C A T C G T A T G A C C G A T C T A G
p-value:1e-9
log p-value:-2.185e+01
Information Content per bp:1.711
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif131.8
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets49.6 +/- 26.4bp
Average Position of motif in Background51.6 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----CAGTWGCAAAGVA
ATTTACAGTAGCAAAA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G A T C G T A A C T G T G A C G T C A T C G A C G T A C T A G T C A G C T G A
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CAGTWGCAAAGVA
ATGTACAGTAGCAAAG--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G A T C G T A A C T G T G A C G T C A T C G A C G T A C T A G T C A G C T G A
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGTWGCAAAGVA--
CAATTGCAAAAATAT
 A G T C C G T A A C T G C G A T C G T A A C T G T G A C G T C A T C G A C G T A C T A G T C A G C T G A A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAGTWGCAAAGVA
-ATTTGCATA---
 A G T C C G T A A C T G C G A T C G T A A C T G T G A C G T C A T C G A C G T A C T A G T C A G C T G A
A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGTWGCAAAGVA
TNTAATTTGCATACNA
 A C G T A C G T A C G T A G T C C G T A A C T G C G A T C G T A A C T G T G A C G T C A T C G A C G T A C T A G T C A G C T G A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGTWGCAAAGVA
TNTAATTTGCATACNA
 A C G T A C G T A C G T A G T C C G T A A C T G C G A T C G T A A C T G T G A C G T C A T C G A C G T A C T A G T C A G C T G A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAGTWGCAAAGVA
TNTAATTTGCATANNN
 A C G T A C G T A C G T A G T C C G T A A C T G C G A T C G T A A C T G T G A C G T C A T C G A C G T A C T A G T C A G C T G A
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGTWGCAAAGVA
CTCATTTGCATW---
 A C G T A C G T A G T C C G T A A C T G C G A T C G T A A C T G T G A C G T C A T C G A C G T A C T A G T C A G C T G A
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGTWGCAAAGVA
TAATTTGCATAA--
 A C G T A G T C C G T A A C T G C G A T C G T A A C T G T G A C G T C A T C G A C G T A C T A G T C A G C T G A
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGTWGCAAAGVA
CGGTTTCAAA---
 A G T C C G T A A C T G C G A T C G T A A C T G T G A C G T C A T C G A C G T A C T A G T C A G C T G A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T