Information for 12-TSTCAGGGSTTCBAWA (Motif 18)

A C G T A T G C G A C T T G A C C G T A C A T G C T A G C T A G A T G C A G C T A C G T A G T C A C T G C G T A C G A T C G T A
Reverse Opposite:
G C A T G C T A G C A T T G A C T C A G T G C A C T G A T A C G G A T C A G T C G T A C C G A T A C T G C T G A A T C G C G T A
p-value:1e-10
log p-value:-2.391e+01
Information Content per bp:1.603
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif4.40%
Number of Background Sequences with motif468.6
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets54.9 +/- 24.9bp
Average Position of motif in Background49.8 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TSTCAGGGSTTCBAWA
TGTCAGGGGGCG----
 A C G T A T G C G A C T T G A C C G T A C A T G C T A G C T A G A T G C A G C T A C G T A G T C A C T G C G T A C G A T C G T A
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TSTCAGGGSTTCBAWA
NNTNNTGTCTGGNNTNG----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T T G A C C G T A C A T G C T A G C T A G A T G C A G C T A C G T A G T C A C T G C G T A C G A T C G T A
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TSTCAGGGSTTCBAWA
WDNCTGGGCA------
 A C G T A T G C G A C T T G A C C G T A C A T G C T A G C T A G A T G C A G C T A C G T A G T C A C T G C G T A C G A T C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TSTCAGGGSTTCBAWA
----NGGGATTA----
 A C G T A T G C G A C T T G A C C G T A C A T G C T A G C T A G A T G C A G C T A C G T A G T C A C T G C G T A C G A T C G T A
A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TSTCAGGGSTTCBAWA
NATTTAAGTACTTANNA-
 A C G T A C G T A C G T A T G C G A C T T G A C C G T A C A T G C T A G C T A G A T G C A G C T A C G T A G T C A C T G C G T A C G A T C G T A
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TSTCAGGGSTTCBAWA
-TTAAGTGCTT-----
 A C G T A T G C G A C T T G A C C G T A C A T G C T A G C T A G A T G C A G C T A C G T A G T C A C T G C G T A C G A T C G T A
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.49
Offset:7
Orientation:forward strand
Alignment:TSTCAGGGSTTCBAWA
-------GCTTCC---
 A C G T A T G C G A C T T G A C C G T A C A T G C T A G C T A G A T G C A G C T A C G T A G T C A C T G C G T A C G A T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-TSTCAGGGSTTCBAWA
NTGTCAN----------
 A C G T A C G T A T G C G A C T T G A C C G T A C A T G C T A G C T A G A T G C A G C T A C G T A G T C A C T G C G T A C G A T C G T A
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TSTCAGGGSTTCBAWA
CTGTCTGG---------
 A C G T A C G T A T G C G A C T T G A C C G T A C A T G C T A G C T A G A T G C A G C T A C G T A G T C A C T G C G T A C G A T C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.47
Offset:0
Orientation:forward strand
Alignment:TSTCAGGGSTTCBAWA-
TTAGAGGGATTAACAAT
 A C G T A T G C G A C T T G A C C G T A C A T G C T A G C T A G A T G C A G C T A C G T A G T C A C T G C G T A C G A T C G T A A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T