Information for 1-ATAGTTTGAAAATGTT (Motif 1)

C G T A C G A T C T G A C T A G A C G T A C G T C G A T C T A G G T C A C G T A C G T A C G T A C G A T C A T G A C G T A C G T
Reverse Opposite:
C G T A T G C A G T A C C G T A C G A T A C G T A C G T C A G T A G T C C G T A C G T A C G T A A G T C A G C T C G T A A C G T
p-value:1e-16
log p-value:-3.908e+01
Information Content per bp:1.800
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.9 +/- 21.8bp
Average Position of motif in Background76.0 +/- 3.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ATAGTTTGAAAATGTT
----TTTGAAACCG--
 C G T A C G A T C T G A C T A G A C G T A C G T C G A T C T A G G T C A C G T A C G T A C G T A C G A T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATAGTTTGAAAATGTT
CCATTGTATGCAAAT---
 A C G T A C G T C G T A C G A T C T G A C T A G A C G T A C G T C G A T C T A G G T C A C G T A C G T A C G T A C G A T C A T G A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T A C G T A C G T

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ATAGTTTGAAAATGTT
HWWNNTAATTRGCHAATTAN
 A C G T A C G T A C G T A C G T C G T A C G A T C T G A C T A G A C G T A C G T C G A T C T A G G T C A C G T A C G T A C G T A C G A T C A T G A C G T A C G T
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G

POU3F2/MA0787.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ATAGTTTGAAAATGTT
-TAATTTGCATAA---
 C G T A C G A T C T G A C T A G A C G T A C G T C G A T C T A G G T C A C G T A C G T A C G T A C G A T C A T G A C G T A C G T
A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ATAGTTTGAAAATGTT
---ATATGCAAAT---
 C G T A C G A T C T G A C T A G A C G T A C G T C G A T C T A G G T C A C G T A C G T A C G T A C G A T C A T G A C G T A C G T
A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ATAGTTTGAAAATGTT
---ATTTGAATT----
 C G T A C G A T C T G A C T A G A C G T A C G T C G A T C T A G G T C A C G T A C G T A C G T A C G A T C A T G A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ATAGTTTGAAAATGTT
--AATATGCAAATT--
 C G T A C G A T C T G A C T A G A C G T A C G T C G A T C T A G G T C A C G T A C G T A C G T A C G A T C A T G A C G T A C G T
A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:ATAGTTTGAAAATGTT---
----NNATNAATTGTTTNN
 C G T A C G A T C T G A C T A G A C G T A C G T C G A T C T A G G T C A C G T A C G T A C G T A C G A T C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ATAGTTTGAAAATGTT
CTAATTTGCATATT--
 C G T A C G A T C T G A C T A G A C G T A C G T C G A T C T A G G T C A C G T A C G T A C G T A C G A T C A T G A C G T A C G T
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ATAGTTTGAAAATGTT-
-TTGTATGCAAATTAGA
 C G T A C G A T C T G A C T A G A C G T A C G T C G A T C T A G G T C A C G T A C G T A C G T A C G A T C A T G A C G T A C G T A C G T
A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A