Information for 1-YCMRGSAGGRTGCKGC (Motif 2)

A G T C A G T C G T C A C T A G A C T G A T G C C G T A A C T G A C T G T C G A A C G T A C T G A G T C C A G T A C T G A G T C
Reverse Opposite:
A C T G A G T C G T C A A C T G A G T C G T C A A G C T A G T C A G T C A C G T A T C G A G T C A G T C A C G T A C T G C T A G
p-value:1e-13
log p-value:-3.184e+01
Information Content per bp:1.849
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.7 +/- 28.5bp
Average Position of motif in Background38.0 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YCMRGSAGGRTGCKGC----
GCCASCAGGGGGCGCYVNNG
 A G T C A G T C G T C A C T A G A C T G A T G C C G T A A C T G A C T G T C G A A C G T A C T G A G T C C A G T A C T G A G T C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:YCMRGSAGGRTGCKGC-
-----NTGGGTGTGGCC
 A G T C A G T C G T C A C T A G A C T G A T G C C G T A A C T G A C T G T C G A A C G T A C T G A G T C C A G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Klf1/MA0493.1/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:YCMRGSAGGRTGCKGC-
------TGGGTGTGGCN
 A G T C A G T C G T C A C T A G A C T G A T G C C G T A A C T G A C T G T C G A A C G T A C T G A G T C C A G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

Klf4/MA0039.2/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:YCMRGSAGGRTGCKGC
------TGGGTGGGGC
 A G T C A G T C G T C A C T A G A C T G A T G C C G T A A C T G A C T G T C G A A C G T A C T G A G T C C A G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:YCMRGSAGGRTGCKGC--
---NNVDGGGYGGGGCYN
 A G T C A G T C G T C A C T A G A C T G A T G C C G T A A C T G A C T G T C G A A C G T A C T G A G T C C A G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:YCMRGSAGGRTGCKGC
----ACAGGATGTGGT
 A G T C A G T C G T C A C T A G A C T G A T G C C G T A A C T G A C T G T C G A A C G T A C T G A G T C C A G T A C T G A G T C
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:YCMRGSAGGRTGCKGC
------DGGGYGKGGC
 A G T C A G T C G T C A C T A G A C T G A T G C C G T A A C T G A C T G T C G A A C G T A C T G A G T C C A G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-YCMRGSAGGRTGCKGC
DCHCAGCAGGRGGCC--
 A C G T A G T C A G T C G T C A C T A G A C T G A T G C C G T A A C T G A C T G T C G A A C G T A C T G A G T C C A G T A C T G A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:YCMRGSAGGRTGCKGC
------TGGGTGTGGC
 A G T C A G T C G T C A C T A G A C T G A T G C C G T A A C T G A C T G T C G A A C G T A C T G A G T C C A G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:YCMRGSAGGRTGCKGC
CACAGCAGGGGG----
 A G T C A G T C G T C A C T A G A C T G A T G C C G T A A C T G A C T G T C G A A C G T A C T G A G T C C A G T A C T G A G T C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T