Information for 12-GCCRYGWTCTCGG (Motif 19)

C T A G A G T C A G T C C T A G G A T C A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G G T C A A C T G C G T A C G A T A G T C C T A G A G T C A C T G A C T G A G T C
p-value:1e-8
log p-value:-1.926e+01
Information Content per bp:1.892
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.5 +/- 6.7bp
Average Position of motif in Background36.9 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCCRYGWTCTCGG----
--AGTATTCTCGGTTGC
 C T A G A G T C A G T C C T A G G A T C A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0127.1_Gata6_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCRYGWTCTCGG----
GCGGCGATATCGCAGCG
 C T A G A G T C A G T C C T A G G A T C A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C G T A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCRYGWTCTCGG----
--NNAATTCTCGNTNAN
 C T A G A G T C A G T C C T A G G A T C A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCCRYGWTCTCGG----
--ACCACTCTCGGTCAC
 C T A G A G T C A G T C C T A G G A T C A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCRYGWTCTCGG
GCCGCCATCTTG-
 C T A G A G T C A G T C C T A G G A T C A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCCRYGWTCTCGG---
-BCNGGTTCTAGANCN
 C T A G A G T C A G T C C T A G G A T C A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCCRYGWTCTCGG----
CTAAGGTTCTAGATCAC
 C T A G A G T C A G T C C T A G G A T C A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

MAX::MYC/MA0059.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCCRYGWTCTCGG
ACCACGTGCTC--
 C T A G A G T C A G T C C T A G G A T C A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:GCCRYGWTCTCGG
---CTGTTCCTGG
 C T A G A G T C A G T C C T A G G A T C A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

CREB3L1/MA0839.1/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GCCRYGWTCTCGG
ATGCCACGTCATCA-
 A C G T A C G T C T A G A G T C A G T C C T A G G A T C A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A A C G T