Information for 10-CAGGCCAGCCGTC (Motif 13)

A T G C C G T A A T C G A T C G A T G C G T A C C G T A A C T G T A G C A G T C A T C G A G C T T A G C
Reverse Opposite:
A T C G C T G A A T G C A C T G A C T G A G T C C G A T A C T G A T C G A T G C A T G C G A C T A T C G
p-value:1e-10
log p-value:-2.450e+01
Information Content per bp:1.781
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.2 +/- 21.6bp
Average Position of motif in Background50.5 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAGGCCAGCCGTC
TCCCAGMCRAGCCCC-
 A C G T A C G T A C G T A T G C C G T A A T C G A T C G A T G C G T A C C G T A A C T G T A G C A G T C A T C G A G C T T A G C
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAGGCCAGCCGTC-
----CCAGACRSVB
 A T G C C G T A A T C G A T C G A T G C G T A C C G T A A C T G T A G C A G T C A T C G A G C T T A G C A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CAGGCCAGCCGTC-
----CCAGCTGTTN
 A T G C C G T A A T C G A T C G A T G C G T A C C G T A A C T G T A G C A G T C A T C G A G C T T A G C A C G T
A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGGCCAGCCGTC
-ATGCCAGACN--
 A T G C C G T A A T C G A T C G A T G C G T A C C G T A A C T G T A G C A G T C A T C G A G C T T A G C
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAGGCCAGCCGTC
--NNGCAGCTGTC
 A T G C C G T A A T C G A T C G A T G C G T A C C G T A A C T G T A G C A G T C A T C G A G C T T A G C
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CAGGCCAGCCGTC
----CCAGACAG-
 A T G C C G T A A T C G A T C G A T G C G T A C C G T A A C T G T A G C A G T C A T C G A G C T T A G C
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CAGGCCAGCCGTC
-----CAGCTGTT
 A T G C C G T A A T C G A T C G A T G C G T A C C G T A A C T G T A G C A G T C A T C G A G C T T A G C
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGGCCAGCCGTC
--NNGCAGCTGTT
 A T G C C G T A A T C G A T C G A T G C G T A C C G T A A C T G T A G C A G T C A T C G A G C T T A G C
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGGCCAGCCGTC
-NNVVCAGCTGBN
 A T G C C G T A A T C G A T C G A T G C G T A C C G T A A C T G T A G C A G T C A T C G A G C T T A G C
A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGGCCAGCCGTC-
ACTATGCCAACCTACC
 A C G T A C G T A T G C C G T A A T C G A T C G A T G C G T A C C G T A A C T G T A G C A G T C A T C G A G C T T A G C A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C