Information for 5-GAGGCTGCCTGCTTCC (Motif 10)

A T C G C G T A A C T G C A T G A G T C A C G T A T C G G T A C A T G C A G C T A C T G A G T C A G C T A C G T A G T C A G T C
Reverse Opposite:
C T A G A C T G C G T A C T G A C T A G G T A C C T G A A T C G A C T G A T G C C G T A A C T G G T A C G T A C G A C T A T G C
p-value:1e-11
log p-value:-2.625e+01
Information Content per bp:1.799
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.4 +/- 17.4bp
Average Position of motif in Background68.0 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.58
Offset:10
Orientation:forward strand
Alignment:GAGGCTGCCTGCTTCC
----------GCTTCC
 A T C G C G T A A C T G C A T G A G T C A C G T A T C G G T A C A T G C A G C T A C T G A G T C A G C T A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGGCTGCCTGCTTCC
TWGTCTGV--------
 A T C G C G T A A C T G C A T G A G T C A C G T A T C G G T A C A T G C A G C T A C T G A G T C A G C T A C G T A G T C A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GAGGCTGCCTGCTTCC-------
-------CCGTCTTCCCCCTCAC
 A T C G C G T A A C T G C A T G A G T C A C G T A T C G G T A C A T G C A G C T A C T G A G T C A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GAGGCTGCCTGCTTCC----
--------NNAYTTCCTGHN
 A T C G C G T A A C T G C A T G A G T C A C G T A T C G G T A C A T G C A G C T A C T G A G T C A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:5
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:GAGGCTGCCTGCTTCC---
-----------CTTCCGGT
 A T C G C G T A A C T G C A T G A G T C A C G T A T C G G T A C A T G C A G C T A C T G A G T C A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.53
Offset:9
Orientation:forward strand
Alignment:GAGGCTGCCTGCTTCC---
---------NRYTTCCGGH
 A T C G C G T A A C T G C A T G A G T C A C G T A T C G G T A C A T G C A G C T A C T G A G T C A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAGGCTGCCTGCTTCC----
NTGACTCANTTTTTCCANTN
 A T C G C G T A A C T G C A T G A G T C A C G T A T C G G T A C A T G C A G C T A C T G A G T C A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

ELF5/MA0136.2/Jaspar

Match Rank:8
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GAGGCTGCCTGCTTCC----
---------NACTTCCGGGT
 A T C G C G T A A C T G C A T G A G T C A C G T A T C G G T A C A T G C A G C T A C T G A G T C A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C C G A T C A G T G T A C G T A C A C T G A T C G A C T G G C A T

ELK4/MA0076.2/Jaspar

Match Rank:9
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GAGGCTGCCTGCTTCC---
--------CCACTTCCGGC
 A T C G C G T A A C T G C A T G A G T C A C G T A T C G G T A C A T G C A G C T A C T G A G T C A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GAGGCTGCCTGCTTCC----
-----TGCCTGCGYCMCCTT
 A T C G C G T A A C T G C A T G A G T C A C G T A T C G G T A C A T G C A G C T A C T G A G T C A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T