Information for 10-AGAGATGCTGGAGCCA (Motif 28)

C G T A C T A G C T G A A C T G C T G A A C G T A T C G A T G C A C G T C T A G A C T G C T G A C T A G A G T C G T A C C G T A
Reverse Opposite:
A C G T A C T G C T A G A G T C A G C T A G T C A G T C C G T A A T C G A T G C C G T A A G C T A G T C A G C T A G T C A C G T
p-value:1e-3
log p-value:-8.665e+00
Information Content per bp:1.842
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.7 +/- 37.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:AGAGATGCTGGAGCCA
---GRTGMTRGAGCC-
 C G T A C T A G C T G A A C T G C T G A A C G T A T C G A T G C A C G T C T A G A C T G C T G A C T A G A G T C G T A C C G T A
A C G T A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGAGATGCTGGAGCCA-
--AGATGCTRCTRCCHT
 C G T A C T A G C T G A A C T G C T G A A C G T A T C G A T G C A C G T C T A G A C T G C T G A C T A G A G T C G T A C C G T A A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:AGAGATGCTGGAGCCA-----
----NTNNNGGGGTCANGNNN
 C G T A C T A G C T G A A C T G C T G A A C G T A T C G A T G C A C G T C T A G A C T G C T G A C T A G A G T C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AGAGATGCTGGAGCCA----
---NNNNTTGGCGCCGANNN
 C G T A C T A G C T G A A C T G C T G A A C G T A T C G A T G C A C G T C T A G A C T G C T G A C T A G A G T C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:AGAGATGCTGGAGCCA
-------GTGGAT---
 C G T A C T A G C T G A A C T G C T G A A C G T A T C G A T G C A C G T C T A G A C T G C T G A C T A G A G T C G T A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AGAGATGCTGGAGCCA-----
----GGCGAGGGGTCAAGGGC
 C G T A C T A G C T G A A C T G C T G A A C G T A T C G A T G C A C G T C T A G A C T G C T G A C T A G A G T C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PH0014.1_Cphx/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AGAGATGCTGGAGCCA--
----ATGATCGAATCAAA
 C G T A C T A G C T G A A C T G C T G A A C G T A T C G A T G C A C G T C T A G A C T G C T G A C T A G A G T C G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.48
Offset:3
Orientation:forward strand
Alignment:AGAGATGCTGGAGCCA
---CATGCGGGTAC--
 C G T A C T A G C T G A A C T G C T G A A C G T A T C G A T G C A C G T C T A G A C T G C T G A C T A G A G T C G T A C C G T A
A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.47
Offset:4
Orientation:forward strand
Alignment:AGAGATGCTGGAGCCA-----
----CTCCAGGGGTCAATTGA
 C G T A C T A G C T G A A C T G C T G A A C G T A T C G A T G C A C G T C T A G A C T G C T G A C T A G A G T C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.47
Offset:4
Orientation:forward strand
Alignment:AGAGATGCTGGAGCCA----
----AGAGCGGGGTCAAGTA
 C G T A C T A G C T G A A C T G C T G A A C G T A T C G A T G C A C G T C T A G A C T G C T G A C T A G A G T C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A