Information for 6-CCACGCAGGGSGC (Motif 9)

A T G C A G T C C G T A A G T C A T C G A T G C C G T A A C T G T C A G A C T G A T G C A T C G A G T C
Reverse Opposite:
A C T G T A G C T A C G G T A C A G T C A G T C C G A T A T C G A T G C T C A G C G A T A C T G A T C G
p-value:1e-10
log p-value:-2.376e+01
Information Content per bp:1.770
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.07%
Number of Background Sequences with motif321.6
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets48.4 +/- 26.7bp
Average Position of motif in Background49.0 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCACGCAGGGSGC
GCCGCGCAGTGCGT
 A C G T A T G C A G T C C G T A A G T C A T C G A T G C C G T A A C T G T C A G A C T G A T G C A T C G A G T C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCACGCAGGGSGC-------
GCCASCAGGGGGCGCYVNNG
 A T G C A G T C C G T A A G T C A T C G A T G C C G T A A C T G T C A G A C T G A T G C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCACGCAGGGSGC-
DCHCAGCAGGRGGCC
 A C G T A T G C A G T C C G T A A G T C A T C G A T G C C G T A A C T G T C A G A C T G A T G C A T C G A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCACGCAGGGSGC
-CCTGCTGAGH--
 A T G C A G T C C G T A A G T C A T C G A T G C C G T A A C T G T C A G A C T G A T G C A T C G A G T C
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCACGCAGGGSGC-
--TGTCAGGGGGCG
 A T G C A G T C C G T A A G T C A T C G A T G C C G T A A C T G T C A G A C T G A T G C A T C G A G T C A C G T
A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

GLIS2/MA0736.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCACGCAGGGSGC-
CTTCGCGGGGGGTC
 A T G C A G T C C G T A A G T C A T C G A T G C C G T A A C T G T C A G A C T G A T G C A T C G A G T C A C G T
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCACGCAGGGSGC
-CACGCA------
 A T G C A G T C C G T A A G T C A T C G A T G C C G T A A C T G T C A G A C T G A T G C A T C G A G T C
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCACGCAGGGSGC-
NCCCCCCCGGGGGGN
 A C G T A T G C A G T C C G T A A G T C A T C G A T G C C G T A A C T G T C A G A C T G A T G C A T C G A G T C A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCACGCAGGGSGC-
ACCCCCCCGGGGGGN
 A C G T A T G C A G T C C G T A A G T C A T C G A T G C C G T A A C T G T C A G A C T G A T G C A T C G A G T C A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCACGCAGGGSGC-
CCCCCCCGGGGGNN
 A T G C A G T C C G T A A G T C A T C G A T G C C G T A A C T G T C A G A C T G A T G C A T C G A G T C A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G