Information for 3-GTGGCCTTGGCCC (Motif 5)

A C T G A G C T A C T G A C T G A G T C A T G C A C G T A C G T A C T G A T C G A G T C A T G C A G T C
Reverse Opposite:
A C T G A T C G A C T G A T G C A G T C C G T A C G T A A T C G A C T G A G T C A G T C T C G A A G T C
p-value:1e-12
log p-value:-2.968e+01
Information Content per bp:1.945
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.2 +/- 20.2bp
Average Position of motif in Background62.4 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTGGCCTTGGCCC
-TGACCTTGAN--
 A C T G A G C T A C T G A C T G A G T C A T G C A C G T A C G T A C T G A T C G A G T C A T G C A G T C
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCCTTGGCCC
BNTGDCCTTG----
 A C G T A C T G A G C T A C T G A C T G A G T C A T G C A C G T A C G T A C T G A T C G A G T C A T G C A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GTGGCCTTGGCCC
-TGACCTTGACCT
 A C T G A G C T A C T G A C T G A G T C A T G C A C G T A C G T A C T G A T C G A G T C A T G C A G T C
A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GTGGCCTTGGCCC
-TGACCTTGAV--
 A C T G A G C T A C T G A C T G A G T C A T G C A C G T A C G T A C T G A T C G A G T C A T G C A G T C
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTGGCCTTGGCCC--
-TGACCTTTGCCCTA
 A C T G A G C T A C T G A C T G A G T C A T G C A C G T A C G T A C T G A T C G A G T C A T G C A G T C A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCCTTGGCCC-
GCTGACCTTGAACTN
 A C G T A C T G A G C T A C T G A C T G A G T C A T G C A C G T A C G T A C T G A T C G A G T C A T G C A G T C A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTGGCCTTGGCCC
-TGACCTTGACCT
 A C T G A G C T A C T G A C T G A G T C A T G C A C G T A C G T A C T G A T C G A G T C A T G C A G T C
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTGGCCTTGGCCC--
-TGACCTTTGCCCCA
 A C T G A G C T A C T G A C T G A G T C A T G C A C G T A C G T A C T G A T C G A G T C A T G C A G T C A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTGGCCTTGGCCC
CTGACCTTTG---
 A C T G A G C T A C T G A C T G A G T C A T G C A C G T A C G T A C T G A T C G A G T C A T G C A G T C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTGGCCTTGGCCC---
-TGACCTTTGCCCTAN
 A C T G A G C T A C T G A C T G A G T C A T G C A C G T A C G T A C T G A T C G A G T C A T G C A G T C A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C