p-value: | 1e-7 |
log p-value: | -1.725e+01 |
Information Content per bp: | 1.735 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 0.99% |
Number of Background Sequences with motif | 35.1 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 52.7 +/- 18.3bp |
Average Position of motif in Background | 52.8 +/- 27.7bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.33 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0207.1_Zic3_2/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GGATGCACACAGCATG--- ----GAGCACAGCAGGACA |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GGATGCACACAGCATG--- ----CCACACAGCAGGAGA |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GGATGCACACAGCATG--- ----CCACACAGCAGGAGA |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GGATGCACACAGCATG ------DCTCAGCAGG |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | GGATGCACACAGCATG -------CACAGN--- |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | GGATGCACACAGCATG ---------CAGCC-- |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GGATGCACACAGCATG--- -------CACAGCAGGGGG |
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PB0091.1_Zbtb3_1/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GGATGCACACAGCATG--- --AATCGCACTGCATTCCG |
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PB0208.1_Zscan4_2/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGATGCACACAGCATG CGAAGCACACAAAATA |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GGATGCACACAGCATG----- ------DCHCAGCAGGRGGCC |
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