Information for 6-AGACGTGCTC (Motif 8)

C G T A A C T G T G C A T G A C T A C G G C A T A T C G A T G C C G A T A T G C
Reverse Opposite:
T A C G C G T A A T C G A T G C C G T A A T G C A C T G A C G T T A G C G C A T
p-value:1e-17
log p-value:-3.931e+01
Information Content per bp:1.671
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets54.9 +/- 27.4bp
Average Position of motif in Background40.7 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AGACGTGCTC
RTACGTGC--
 C G T A A C T G T G C A T G A C T A C G G C A T A T C G A T G C C G A T A T G C
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGACGTGCTC
GGACGTGC--
 C G T A A C T G T G C A T G A C T A C G G C A T A T C G A T G C C G A T A T G C
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGACGTGCTC
-TACGTGCV-
 C G T A A C T G T G C A T G A C T A C G G C A T A T C G A T G C C G A T A T G C
A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AGACGTGCTC
GGGTACGTGC--
 A C G T A C G T C G T A A C T G T G C A T G A C T A C G G C A T A T C G A T G C C G A T A T G C
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGACGTGCTC
NACACGTGCN-
 A C G T C G T A A C T G T G C A T G A C T A C G G C A T A T C G A T G C C G A T A T G C
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGACGTGCTC
ACACGTGC--
 C G T A A C T G T G C A T G A C T A C G G C A T A T C G A T G C C G A T A T G C
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGACGTGCTC
AACACGTGTT-
 A C G T C G T A A C T G T G C A T G A C T A C G G C A T A T C G A T G C C G A T A T G C
C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AGACGTGCTC
TAACGACACGTGC--
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G T G C A T G A C T A C G G C A T A T C G A T G C C G A T A T G C
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T A C G T

PB0043.1_Max_1/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AGACGTGCTC-
CCNNANCACGTGGTCN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G T G C A T G A C T A C G G C A T A T C G A T G C C G A T A T G C A C G T
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGACGTGCTC
ACCACGTGCC-
 A C G T C G T A A C T G T G C A T G A C T A C G G C A T A T C G A T G C C G A T A T G C
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T