Information for 3-AACATMACAG (Motif 5)

G C T A T C G A G T A C G T C A G A C T G T C A C G T A T G A C C G T A C A T G
Reverse Opposite:
G T A C C G A T A C T G G C A T A C G T C T G A A C G T C A T G A G C T C G A T
p-value:1e-19
log p-value:-4.412e+01
Information Content per bp:1.593
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets41.2 +/- 21.9bp
Average Position of motif in Background54.2 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf7/MA0769.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AACATMACAG-
AAAGATCAAAGG
 A C G T G C T A T C G A G T A C G T C A G A C T G T C A C G T A T G A C C G T A C A T G A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AACATMACAG---
AAAGATCAAAGGAA
 A C G T G C T A T C G A G T A C G T C A G A C T G T C A C G T A T G A C C G T A C A T G A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AACATMACAG----
AACACCAAAACAAAGGA
 A C G T A C G T A C G T G C T A T C G A G T A C G T C A G A C T G T C A C G T A T G A C C G T A C A T G A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AACATMACAG---
-ACATCAAAGGNA
 G C T A T C G A G T A C G T C A G A C T G T C A C G T A T G A C C G T A C A T G A C G T A C G T A C G T
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AACATMACAG-
-ACWTCAAAGG
 G C T A T C G A G T A C G T C A G A C T G T C A C G T A T G A C C G T A C A T G A C G T
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AACATMACAG-
-ACATCAAAGG
 G C T A T C G A G T A C G T C A G A C T G T C A C G T A T G A C C G T A C A T G A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AACATMACAG-----
NNNAGATCAAAGGANNN
 A C G T A C G T G C T A T C G A G T A C G T C A G A C T G T C A C G T A T G A C C G T A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AACATMACAG----
AAAGATCAAAGGGTT
 A C G T G C T A T C G A G T A C G T C A G A C T G T C A C G T A T G A C C G T A C A T G A C G T A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AACATMACAG-----
TATAGATCAAAGGAAAA
 A C G T A C G T G C T A T C G A G T A C G T C A G A C T G T C A C G T A T G A C C G T A C A T G A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:AACATMACAG-
-----CACAGN
 G C T A T C G A G T A C G T C A G A C T G T C A C G T A T G A C C G T A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C