Information for 3-AGTSTKCAGAAAA (Motif 4)

G C T A A T C G A C G T A T C G G A C T A C G T A T G C G T C A A C T G C T G A C T G A T G C A G T C A
Reverse Opposite:
A C G T A C G T G A C T G A C T T G A C A C G T A T C G T G C A C T G A T A G C T G C A T A G C C A G T
p-value:1e-22
log p-value:-5.236e+01
Information Content per bp:1.615
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif4.60%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets47.5 +/- 25.8bp
Average Position of motif in Background25.0 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3/MA0037.2/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AGTSTKCAGAAAA--
-------AGATAAGA
 G C T A A T C G A C G T A T C G G A C T A C G T A T G C G T C A A C T G C T G A C T G A T G C A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGTSTKCAGAAAA--
CAATTGCAAAAATAT
 G C T A A T C G A C G T A T C G G A C T A C G T A T G C G T C A A C T G C T G A C T G A T G C A G T C A A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AGTSTKCAGAAAA---
------CAGATAAGGN
 G C T A A T C G A C G T A T C G G A C T A C G T A T G C G T C A A C T G C T G A C T G A T G C A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGTSTKCAGAAAA---
-ATTTGCATACAATGG
 G C T A A T C G A C G T A T C G G A C T A C G T A T G C G T C A A C T G C T G A C T G A T G C A G T C A A C G T A C G T A C G T
A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AGTSTKCAGAAAA---
------NAGATAAGNN
 G C T A A T C G A C G T A T C G G A C T A C G T A T G C G T C A A C T G C T G A C T G A T G C A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGTSTKCAGAAAA
---CCYMATAAAA
 G C T A A T C G A C G T A T C G G A C T A C G T A T G C G T C A A C T G C T G A C T G A T G C A G T C A
A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGTSTKCAGAAAA-
----NACAGGAAAT
 G C T A A T C G A C G T A T C G G A C T A C G T A T G C G T C A A C T G C T G A C T G A T G C A G T C A A C G T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

GATA2/MA0036.2/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGTSTKCAGAAAA------
-----NCAGATAAGAANNN
 G C T A A T C G A C G T A T C G G A C T A C G T A T G C G T C A A C T G C T G A C T G A T G C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGTSTKCAGAAAA-
----GTCATAAAAN
 G C T A A T C G A C G T A T C G G A C T A C G T A T G C G T C A A C T G C T G A C T G A T G C A G T C A A C G T
A C G T A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGTSTKCAGAAAA---
-----ANAGATAAGAA
 G C T A A T C G A C G T A T C G G A C T A C G T A T G C G T C A A C T G C T G A C T G A T G C A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A