Information for 11-TKVCTGAGAYAAA (Motif 28)

A C G T C A T G T A C G A G T C A C G T C T A G C G T A A T C G C G T A A G T C C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T G C A T T C A G C G A T A T G C A C G T G A T C G T C A A C T G A T G C G T A C G T C A
p-value:1e-12
log p-value:-2.837e+01
Information Content per bp:1.738
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets47.6 +/- 24.5bp
Average Position of motif in Background65.5 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TKVCTGAGAYAAA-----
--AAACAGACAAAGGAAT
 A C G T C A T G T A C G A G T C A C G T C T A G C G T A A T C G C G T A A G T C C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TKVCTGAGAYAAA
-TGCTGACTCA--
 A C G T C A T G T A C G A G T C A C G T C T A G C G T A A T C G C G T A A G T C C G T A G T C A C G T A
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TKVCTGAGAYAAA
-TGCTGAGTCA--
 A C G T C A T G T A C G A G T C A C G T C T A G C G T A A T C G C G T A A G T C C G T A G T C A C G T A
A C G T C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TKVCTGAGAYAAA--
-----AAAACAAAGG
 A C G T C A T G T A C G A G T C A C G T C T A G C G T A A T C G C G T A A G T C C G T A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TKVCTGAGAYAAA-
------AGATAAGA
 A C G T C A T G T A C G A G T C A C G T C T A G C G T A A T C G C G T A A G T C C G T A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TKVCTGAGAYAAA-------
NNCCTGNAAAAAAAAAAAAA
 A C G T C A T G T A C G A G T C A C G T C T A G C G T A A T C G C G T A A G T C C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

PB0186.1_Tcf3_2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TKVCTGAGAYAAA--
AGCCGAAAAAAAAAT
 A C G T C A T G T A C G A G T C A C G T C T A G C G T A A T C G C G T A A G T C C G T A G T C A C G T A A C G T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TKVCTGAGAYAAA-------
NNCCTGNAAAAAAAAAAAAA
 A C G T C A T G T A C G A G T C A C G T C T A G C G T A A T C G C G T A A G T C C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TKVCTGAGAYAAA
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T A C G T A C G T C A T G T A C G A G T C A C G T C T A G C G T A A T C G C G T A A G T C C G T A G T C A C G T A
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TKVCTGAGAYAAA
AAANTGCTGACTNAG-
 A C G T A C G T A C G T A C G T C A T G T A C G A G T C A C G T C T A G C G T A A T C G C G T A A G T C C G T A G T C A C G T A
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G A C G T