Information for 15-TGGGAATAGC (Motif 23)

C G A T A C T G A C T G C T A G T G C A C G T A G C A T T G C A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A C G A T A C G T A G T C G T A C A G T C C G T A
p-value:1e-13
log p-value:-3.127e+01
Information Content per bp:1.796
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets44.6 +/- 23.3bp
Average Position of motif in Background49.6 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAATAGC
CSTGGGAAAD--
 A C G T A C G T C G A T A C T G A C T G C T A G T G C A C G T A G C A T T G C A A C T G A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGGGAATAGC----
AGGGGGATTAGCTGCC
 A C G T A C G T C G A T A C T G A C T G C T A G T G C A C G T A G C A T T G C A A C T G A G T C A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGGGAATAGC-
-TGGAACAGMA
 C G A T A C T G A C T G C T A G T G C A C G T A G C A T T G C A A C T G A G T C A C G T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGGGAATAGC
--GGATTAGC
 C G A T A C T G A C T G C T A G T G C A C G T A G C A T T G C A A C T G A G T C
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

PH0015.1_Crx/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGGGAATAGC--
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G C T A G T G C A C G T A G C A T T G C A A C T G A G T C A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGGAATAGC
TGGGTGTGGC
 C G A T A C T G A C T G C T A G T G C A C G T A G C A T T G C A A C T G A G T C
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGAATAGC-
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C T A G T G C A C G T A G C A T T G C A A C T G A G T C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGGGAATAGC
WDNCTGGGCA----
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G C T A G T G C A C G T A G C A T T G C A A C T G A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGGAATAGC
NNGGATTAGN
 C G A T A C T G A C T G C T A G T G C A C G T A G C A T T G C A A C T G A G T C
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGGAATAGC
-GGGATTANN
 C G A T A C T G A C T G C T A G T G C A C G T A G C A T T G C A A C T G A G T C
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G