Information for 12-TTTATGCTGC (Motif 19)

A G C T A C G T A G C T G T C A A C G T A C T G A G T C A C G T A T C G A G T C
Reverse Opposite:
T A C G A T G C C G T A A C T G A G T C C G T A A C G T C T G A C G T A C T G A
p-value:1e-13
log p-value:-3.170e+01
Information Content per bp:1.865
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets54.5 +/- 22.1bp
Average Position of motif in Background62.6 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTATGCTGC
DGWTTTATGRCN-
 A C G T A C G T A C G T A G C T A C G T A G C T G T C A A C G T A C T G A G T C A C G T A T C G A G T C
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTATGCTGC
NTTTTATGAC--
 A C G T A C G T A G C T A C G T A G C T G T C A A C G T A C T G A G T C A C G T A T C G A G T C
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGCTGC
TTTTATTGC--
 A C G T A G C T A C G T A G C T G T C A A C G T A C T G A G T C A C G T A T C G A G T C
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTTATGCTGC
----NGCTN-
 A G C T A C G T A G C T G T C A A C G T A C T G A G T C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTTATGCTGC-
AATTTGCTGAC
 A G C T A C G T A G C T G T C A A C G T A C T G A G T C A C G T A T C G A G T C A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTATGCTGC-----
AAANTGCTGACTNAG
 A G C T A C G T A G C T G T C A A C G T A C T G A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATGCTGC
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A G C T G T C A A C G T A C T G A G T C A C G T A T C G A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATGCTGC
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A G C T G T C A A C G T A C T G A G T C A C G T A T C G A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGCTGC----
NNTCCTGCTGTGNNN
 A C G T A G C T A C G T A G C T G T C A A C G T A C T G A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGCTGC----
TCNCCTGCTGNGNNN
 A C G T A G C T A C G T A G C T G T C A A C G T A C T G A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G