Information for 4-TMAGCTGGCTGGG (Motif 10)

A C G T G T A C C T G A A C T G G T A C A C G T A C T G A C T G G T A C C G A T T A C G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A C T G G T A C A G T C G T C A A C T G G T A C A G C T A C T G T C G A
p-value:1e-17
log p-value:-3.931e+01
Information Content per bp:1.754
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets59.4 +/- 20.4bp
Average Position of motif in Background59.6 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TMAGCTGGCTGGG-----
-GTATTGGGTGGGTAATT
 A C G T G T A C C T G A A C T G G T A C A C G T A C T G A C T G G T A C C G A T T A C G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TMAGCTGGCTGGG--
-----WDNCTGGGCA
 A C G T G T A C C T G A A C T G G T A C A C G T A C T G A C T G G T A C C G A T T A C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

INSM1/MA0155.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TMAGCTGGCTGGG----
-----TGTCAGGGGGCG
 A C G T G T A C C T G A A C T G G T A C A C G T A C T G A C T G G T A C C G A T T A C G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TMAGCTGGCTGGG
NAHCAGCTGD-----
 A C G T A C G T A C G T G T A C C T G A A C T G G T A C A C G T A C T G A C T G G T A C C G A T T A C G A C T G A C T G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TMAGCTGGCTGGG----
NAGANTGGCGGGGNGNA
 A C G T G T A C C T G A A C T G G T A C A C G T A C T G A C T G G T A C C G A T T A C G A C T G A C T G A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TMAGCTGGCTGGG
NAACAGCTGG-----
 A C G T A C G T A C G T G T A C C T G A A C T G G T A C A C G T A C T G A C T G G T A C C G A T T A C G A C T G A C T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TMAGCTGGCTGGG
----CTGTCTGG-
 A C G T G T A C C T G A A C T G G T A C A C G T A C T G A C T G G T A C C G A T T A C G A C T G A C T G
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TMAGCTGGCTGGG
-GGTCTGGCAT--
 A C G T G T A C C T G A A C T G G T A C A C G T A C T G A C T G G T A C C G A T T A C G A C T G A C T G
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TMAGCTGGCTGGG
VNAVCAGCTGGC----
 A C G T A C G T A C G T A C G T G T A C C T G A A C T G G T A C A C G T A C T G A C T G G T A C C G A T T A C G A C T G A C T G
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TMAGCTGGCTGGG----
NNTNNTGTCTGGNNTNG
 A C G T G T A C C T G A A C T G G T A C A C G T A C T G A C T G G T A C C G A T T A C G A C T G A C T G A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G