Information for 14-TCTTGTTCCT (Motif 42)

A C G T A G T C A C G T A C G T A C T G A C G T A C G T A T G C A T G C A C G T
Reverse Opposite:
C G T A A T C G A T C G C G T A C G T A A G T C C G T A C G T A A C T G C G T A
p-value:1e-7
log p-value:-1.773e+01
Information Content per bp:1.943
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets34.9 +/- 20.3bp
Average Position of motif in Background52.0 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TCTTGTTCCT--
AANTTATTGTTCTNNA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A T G C A T G C A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0173.1_Sox21_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TCTTGTTCCT---
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A T G C A T G C A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TCTTGTTCCT--
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A T G C A T G C A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCTTGTTCCT----
NTNTTGTTGTTTGTN
 A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TCTTGTTCCT---
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A T G C A T G C A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCTTGTTCCT--
--CTGTTCCTGG
 A C G T A G T C A C G T A C G T A C T G A C G T A C G T A T G C A T G C A C G T A C G T A C G T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCTTGTTCCT
-ATTGTT---
 A C G T A G T C A C G T A C G T A C T G A C G T A C G T A T G C A T G C A C G T
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:8
Score:0.63
Offset:-8
Orientation:reverse strand
Alignment:--------TCTTGTTCCT----
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TCTTGTTCCT--
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A T G C A T G C A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TCTTGTTCCT--
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A T G C A T G C A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G