Information for 13-BCCACATCACTCC (Motif 32)

A C G T A G T C A G T C G T C A A G T C C G T A C G A T A T G C C G T A G T A C A C G T A T G C A G T C
Reverse Opposite:
C T A G A T C G C G T A A C T G A C G T A T C G C G T A A C G T A C T G A C G T A C T G A C T G T C G A
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.866
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets33.1 +/- 24.1bp
Average Position of motif in Background49.9 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---BCCACATCACTCC
NWAACCACADNN----
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A G T C C G T A C G A T A T G C C G T A G T A C A C G T A T G C A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--BCCACATCACTCC
GTGCCACGTCATCA-
 A C G T A C G T A C G T A G T C A G T C G T C A A G T C C G T A C G A T A T G C C G T A G T A C A C G T A T G C A G T C
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-BCCACATCACTCC
ATCCAC--------
 A C G T A C G T A G T C A G T C G T C A A G T C C G T A C G A T A T G C C G T A G T A C A C G T A T G C A G T C
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--BCCACATCACTCC
AAACCACAGC-----
 A C G T A C G T A C G T A G T C A G T C G T C A A G T C C G T A C G A T A T G C C G T A G T A C A C G T A T G C A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---BCCACATCACTCC
CAAACAACAACACCT-
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A G T C C G T A C G A T A T G C C G T A G T A C A C G T A T G C A G T C
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---BCCACATCACTCC-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A G T C C G T A C G A T A T G C C G T A G T A C A C G T A T G C A G T C A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--BCCACATCACTCC
AAACCACAGAN----
 A C G T A C G T A C G T A G T C A G T C G T C A A G T C C G T A C G A T A T G C C G T A G T A C A C G T A T G C A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--BCCACATCACTCC
AAACCACANN-----
 A C G T A C G T A C G T A G T C A G T C G T C A A G T C C G T A C G A T A T G C C G T A G T A C A C G T A T G C A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--BCCACATCACTCC
ATGTCACAACAACAC
 A C G T A C G T A C G T A G T C A G T C G T C A A G T C C G T A C G A T A T G C C G T A G T A C A C G T A T G C A G T C
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:BCCACATCACTCC-
----MRSCACTYAA
 A C G T A G T C A G T C G T C A A G T C C G T A C G A T A T G C C G T A G T A C A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A