Information for 8-GAGCACACAC (Motif 30)

A C T G T C G A C A T G G A T C C T G A A G T C C G T A T G A C C G T A G A T C
Reverse Opposite:
C T A G C G A T A C T G C G A T A C T G A G C T C T A G G T A C A G C T G T A C
p-value:1e-9
log p-value:-2.211e+01
Information Content per bp:1.820
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif183.1
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets49.3 +/- 21.5bp
Average Position of motif in Background49.9 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GAGCACACAC----
AGCGGCACACACGCAA
 A C G T A C G T A C T G T C G A C A T G G A T C C T G A A G T C C G T A T G A C C G T A G A T C A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GAGCACACAC----
CGAAGCACACAAAATA
 A C G T A C G T A C T G T C G A C A T G G A T C C T G A A G T C C G T A T G A C C G T A G A T C A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------GAGCACACAC-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A C A T G G A T C C T G A A G T C C G T A T G A C C G T A G A T C A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GAGCACACAC--
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G T C G A C A T G G A T C C T G A A G T C C G T A T G A C C G T A G A T C A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GAGCACACAC--
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A C G T A C T G T C G A C A T G G A T C C T G A A G T C C G T A T G A C C G T A G A T C A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GAGCACACAC-
GGACCACCCACG
 A C G T A C T G T C G A C A T G G A T C C T G A A G T C C G T A T G A C C G T A G A T C A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAGCACACAC----
--GGACACACCCCC
 A C T G T C G A C A T G G A T C C T G A A G T C C G T A T G A C C G T A G A T C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGCACACAC
AAGCACTTAA
 A C T G T C G A C A T G G A T C C T G A A G T C C G T A T G A C C G T A G A T C
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGCACACAC
GCGACCACACTG
 A C G T A C G T A C T G T C G A C A T G G A T C C T G A A G T C C G T A T G A C C G T A G A T C
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGCACACAC
CCAGGAACAG--
 A C G T A C G T A C T G T C G A C A T G G A T C C T G A A G T C C G T A T G A C C G T A G A T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T