Information for 12-GCTGGAAGCYATR (Motif 28)

A C T G A G T C A C G T A C T G A T C G G C T A C G T A A C T G A G T C G A C T C G T A C G A T C T A G
Reverse Opposite:
G A C T C G T A C G A T C T G A A C T G A G T C A C G T C G A T A T G C G T A C C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.246e+01
Information Content per bp:1.785
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.6 +/- 24.5bp
Average Position of motif in Background73.5 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCTGGAAGCYATR
---NGAAGC----
 A C T G A G T C A C G T A C T G A T C G G C T A C G T A A C T G A G T C G A C T C G T A C G A T C T A G
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGAAGCYATR
NGCTN---------
 A C G T A C T G A G T C A C G T A C T G A T C G G C T A C G T A A C T G A G T C G A C T C G T A C G A T C T A G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCTGGAAGCYATR
CTGGCAGNCTGCCA--
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A T C G G C T A C G T A A C T G A G T C G A C T C G T A C G A T C T A G
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGAAGCYATR
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A T C G G C T A C G T A A C T G A G T C G A C T C G T A C G A T C T A G
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGAAGCYATR
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A T C G G C T A C G T A A C T G A G T C G A C T C G T A C G A T C T A G
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGAAGCYATR
NGCCTGAGGCN---
 A C G T A C T G A G T C A C G T A C T G A T C G G C T A C G T A A C T G A G T C G A C T C G T A C G A T C T A G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCTGGAAGCYATR
CWGGCGGGAA------
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A T C G G C T A C G T A A C T G A G T C G A C T C G T A C G A T C T A G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGAAGCYATR
ANTGCCTGAGGCAAN-
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A T C G G C T A C G T A A C T G A G T C G A C T C G T A C G A T C T A G
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCTGGAAGCYATR
AGCCTCAGGCA---
 A C G T A C T G A G T C A C G T A C T G A T C G G C T A C G T A A C T G A G T C G A C T C G T A C G A T C T A G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCTGGAAGCYATR
GGCGGGAARN----
 A C G T A C T G A G T C A C G T A C T G A T C G G C T A C G T A A C T G A G T C G A C T C G T A C G A T C T A G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T