Information for 5-KCGCTGGGGCAAC (Motif 9)

A C T G A G T C A T C G G A T C G A C T A C T G A T C G C T A G A T C G T A G C T C G A T C G A G T A C
Reverse Opposite:
C A T G A G C T A C G T A C T G A T G C A G T C A T G C A G T C C T G A C A T G A T G C T A C G G T A C
p-value:1e-6
log p-value:-1.425e+01
Information Content per bp:1.629
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif6.76%
Number of Background Sequences with motif105.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets45.3 +/- 24.0bp
Average Position of motif in Background53.2 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0204.1_Zfp740_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--KCGCTGGGGCAAC--
ANTNCCGGGGGGAANTT
 A C G T A C G T A C T G A G T C A T C G G A T C G A C T A C T G A T C G C T A G A T C G T A G C T C G A T C G A G T A C A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KCGCTGGGGCAAC---
NNNNTTGGGCACNNCN
 A C T G A G T C A T C G G A T C G A C T A C T G A T C G C T A G A T C G T A G C T C G A T C G A G T A C A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--KCGCTGGGGCAAC
NTGCCCTAGGGCAA-
 A C G T A C G T A C T G A G T C A T C G G A T C G A C T A C T G A T C G C T A G A T C G T A G C T C G A T C G A G T A C
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-KCGCTGGGGCAAC
TGCCCNGGGGCA--
 A C G T A C T G A G T C A T C G G A T C G A C T A C T G A T C G C T A G A T C G T A G C T C G A T C G A G T A C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-KCGCTGGGGCAAC
TGCCCTNGGGCA--
 A C G T A C T G A G T C A T C G G A T C G A C T A C T G A T C G C T A G A T C G T A G C T C G A T C G A G T A C
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-KCGCTGGGGCAAC
TGCCCTNGGGCA--
 A C G T A C T G A G T C A T C G G A T C G A C T A C T G A T C G C T A G A T C G T A G C T C G A T C G A G T A C
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:KCGCTGGGGCAAC-
TTGCCATGGCAACN
 A C T G A G T C A T C G G A T C G A C T A C T G A T C G C T A G A T C G T A G C T C G A T C G A G T A C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--KCGCTGGGGCAAC
GTCCCCAGGGGA---
 A C G T A C G T A C T G A G T C A T C G G A T C G A C T A C T G A T C G C T A G A T C G T A G C T C G A T C G A G T A C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--KCGCTGGGGCAAC
NGTCCCNNGGGA---
 A C G T A C G T A C T G A G T C A T C G G A T C G A C T A C T G A T C G C T A G A T C G T A G C T C G A T C G A G T A C
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:KCGCTGGGGCAAC
----TGGGGA---
 A C T G A G T C A T C G G A T C G A C T A C T G A T C G C T A G A T C G T A G C T C G A T C G A G T A C
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T