Information for 4-YACAMTCASAMSW (Motif 7)

A G C T C G T A A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A G T A C A T C G C G T A
Reverse Opposite:
C G A T A T G C A C T G A C G T A T C G A C G T A C T G C T G A A C G T A C G T A C T G A C G T C T G A
p-value:1e-6
log p-value:-1.508e+01
Information Content per bp:1.825
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.05%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets33.5 +/- 28.0bp
Average Position of motif in Background46.7 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:YACAMTCASAMSW
-CCAATCAA----
 A G C T C G T A A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A G T A C A T C G C G T A
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:YACAMTCASAMSW
-----TCACACCT
 A G C T C G T A A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A G T A C A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:YACAMTCASAMSW
-----TCACACCT
 A G C T C G T A A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A G T A C A T C G C G T A
A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---YACAMTCASAMSW-
GACCACATTCATACAAT
 A C G T A C G T A C G T A G C T C G T A A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A G T A C A T C G C G T A A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:YACAMTCASAMSW
-----TCACACCT
 A G C T C G T A A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A G T A C A T C G C G T A
A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:YACAMTCASAMSW
-CAAATCACTG--
 A G C T C G T A A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A G T A C A T C G C G T A
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:YACAMTCASAMSW
-----TCACACCT
 A G C T C G T A A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A G T A C A T C G C G T A
A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:YACAMTCASAMSW-
----TTCACACCTT
 A G C T C G T A A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A G T A C A T C G C G T A A C G T
A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:YACAMTCASAMSW
--AAATCACAGCA
 A G C T C G T A A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A G T A C A T C G C G T A
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:YACAMTCASAMSW
GACAATGNN----
 A G C T C G T A A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A G T A C A T C G C G T A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T