Information for 3-ATGCGGGATCTTGCTG (Motif 13)

C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A A C G T A G T C A G T C A G T C A C T G A G T C C G T A A C G T
p-value:1e-5
log p-value:-1.369e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets11.5 +/- 3.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0024.1_Gcm1_1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATGCGGGATCTTGCTG
NNNNATGCGGGTNNNN----
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGCGGGATCTTGCTG
TATGCGGGTA-------
 A C G T C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGCGGGATCTTGCTG
CATGCGGGTAC------
 A C G T C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ATGCGGGATCTTGCTG---
----GGCCYCCTGCTGDGH
 C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:ATGCGGGATCTTGCTG-----
------NNTCCTGCTGTGNNN
 C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:ATGCGGGATCTTGCTG
-ANCAGGATGT-----
 C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ATGCGGGATCTTGCTG
-GGCGGGAARN-----
 C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:ATGCGGGATCTTGCTG
-TGCTGAGTCATNNTG
 C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G
A C G T G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.50
Offset:9
Orientation:forward strand
Alignment:ATGCGGGATCTTGCTG---
---------CCTGCTGAGH
 C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:forward strand
Alignment:ATGCGGGATCTTGCTG--
-------AATTTGCTGAC
 C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C