Information for 7-GATGTTAATGCGG (Motif 11)

A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C G T A G T C
p-value:1e-5
log p-value:-1.369e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 24.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GATGTTAATGCGG
TATGCWAATBAV-
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GATGTTAATGCGG
WATGCAAATGAG-
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GATGTTAATGCGG----
GACGATAATGAGCTTGC
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GATGTTAATGCGG
AGGTGTTAAT----
 A C G T A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GATGTTAATGCGG
TATGCAAAT----
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GATGTTAATGCGG----
AAACATAATGAGGTTGC
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GATGTTAATGCGG
---GKTAATGR--
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G
A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GATGTTAATGCGG-
----NTAATGAGCT
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GATGTTAATGCGG
TATGCAAAT----
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GATGTTAATGCGG
TTATGCAAATTA--
 A C G T A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T