Information for 8-WGGAAACKCCWCC (Motif 7)

C G A T A C T G A T C G C G T A C T G A C G T A A G T C A C T G A G T C A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G C G A T A C T G A C T G G T A C A C T G A C G T A G C T A C G T A T G C A G T C C G T A
p-value:1e-9
log p-value:-2.174e+01
Information Content per bp:1.899
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.6 +/- 26.2bp
Average Position of motif in Background42.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:WGGAAACKCCWCC
-GGAAATTCCC--
 C G A T A C T G A T C G C G T A C T G A C G T A A G T C A C T G A G T C A G T C C G T A A G T C A G T C
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:WGGAAACKCCWCC
-GGAAANCCCC--
 C G A T A C T G A T C G C G T A C T G A C G T A A G T C A C T G A G T C A G T C C G T A A G T C A G T C
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:WGGAAACKCCWCC
-GGAAATTCCC--
 C G A T A C T G A T C G C G T A C T G A C G T A A G T C A C T G A G T C A G T C C G T A A G T C A G T C
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:WGGAAACKCCWCC
-GGAAATCCCC--
 C G A T A C T G A T C G C G T A C T G A C G T A A G T C A C T G A G T C A G T C C G T A A G T C A G T C
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:WGGAAACKCCWCC
-GGACACACCCCC
 C G A T A C T G A T C G C G T A C T G A C G T A A G T C A C T G A G T C A G T C C G T A A G T C A G T C
A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--WGGAAACKCCWCC
NNTGGAAANN-----
 A C G T A C G T C G A T A C T G A T C G C G T A C T G A C G T A A G T C A C T G A G T C A G T C C G T A A G T C A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--WGGAAACKCCWCC
AATGGAAAAT-----
 A C G T A C G T C G A T A C T G A T C G C G T A C T G A C G T A A G T C A C T G A G T C A G T C C G T A A G T C A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--WGGAAACKCCWCC
AATGGAAAAT-----
 A C G T A C G T C G A T A C T G A T C G C G T A C T G A C G T A A G T C A C T G A G T C A G T C C G T A A G T C A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:WGGAAACKCCWCC
GGGAAATCCCCN-
 C G A T A C T G A T C G C G T A C T G A C G T A A G T C A C T G A G T C A G T C C G T A A G T C A G T C
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:WGGAAACKCCWCC
TGGAAAA------
 C G A T A C T G A T C G C G T A C T G A C G T A A G T C A C T G A G T C A G T C C G T A A G T C A G T C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T