Information for 4-CTCCGTCACACGC (Motif 8)

A G T C A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C G T C A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C C T A G A C G T A C T G A C G T A C T G T C G A A G T C A C T G A C T G C G T A A C T G
p-value:1e-11
log p-value:-2.606e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.7 +/- 14.4bp
Average Position of motif in Background31.2 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTCCGTCACACGC-
----GTCACATGAY
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C G T C A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

Atf1/MA0604.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCCGTCACACGC
-TACGTCAT----
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C G T C A A G T C A C T G A G T C
A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CTCCGTCACACGC-
--------CACGCA
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C G T C A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCCGTCACACGC
GCTCCG--------
 A C G T A G T C A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C G T C A A G T C A C T G A G T C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTCCGTCACACGC--
-----TBGCACGCAA
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C G T C A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTCCGTCACACGC-
---GGTCACATGAC
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C G T C A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTCCGTCACACGC
---GGTCACGTGG
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C G T C A A G T C A C T G A G T C
A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CTCCGTCACACGC
-----TCACACCT
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C G T C A A G T C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCCGTCACACGC
--ACGTCA-----
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C G T C A A G T C A C T G A G T C
A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTCCGTCACACGC-
----GCCACACCCA
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C G T C A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A