Information for 3-CGTCCAGCCCGGG (Motif 7)

A G T C T C A G A G C T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A C T G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C T G A C T G C T A G A G T C A G C T A C T G A C T G C T G A A G T C A C T G
p-value:1e-11
log p-value:-2.606e+01
Information Content per bp:1.898
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 34.4bp
Average Position of motif in Background56.4 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTCCAGCCCGGG
GGTCCCGCCC---
 A G T C T C A G A G C T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A C T G C T A G A C T G
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGTCCAGCCCGGG---
--ACATGCCCGGGCAT
 A G T C T C A G A G C T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A C T G C T A G A C T G A C G T A C G T A C G T
A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCAGCCCGGG
NCTTCCCGCCC---
 A C G T A G T C T C A G A G C T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A C T G C T A G A C T G
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCAGCCCGGG
NNTTCCCGCCC---
 A C G T A G T C T C A G A G C T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A C T G C T A G A C T G
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGTCCAGCCCGGG----
--NCCCCCCCGGGGGGN
 A G T C T C A G A G C T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A C T G C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGTCCAGCCCGGG----
--ACCCCCCCGGGGGGN
 A G T C T C A G A G C T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A C T G C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGTCCAGCCCGGG-
----GAGSCCGAGC
 A G T C T C A G A G C T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A C T G C T A G A C T G A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGTCCAGCCCGGG----
---CCCCCCCGGGGGNN
 A G T C T C A G A G C T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A C T G C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGTCCAGCCCGGG
-TTCCCGCCWG--
 A G T C T C A G A G C T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A C T G C T A G A C T G
A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGTCCAGCCCGGG-----
----CAGGCCNNGGCCNN
 A G T C T C A G A G C T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A C T G C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C