Information for 2-AGGCACAGGCGCA (Motif 5)

C T G A A C T G A C T G A G T C C T G A A G T C C G T A A T C G A C T G A G T C C A T G A T G C C G T A
Reverse Opposite:
A C G T A T C G G A T C A C T G A G T C A T G C A C G T A C T G A G C T A C T G A G T C A G T C A G C T
p-value:1e-11
log p-value:-2.644e+01
Information Content per bp:1.898
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 15.9bp
Average Position of motif in Background38.7 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AGGCACAGGCGCA
-TGCGCAGGCGC-
 C T G A A C T G A C T G A G T C C T G A A G T C C G T A A T C G A C T G A G T C C A T G A T G C C G T A
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AGGCACAGGCGCA-
--GCGCATGCGCAG
 C T G A A C T G A C T G A G T C C T G A A G T C C G T A A T C G A C T G A G T C C A T G A T G C C G T A A C G T
A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGGCACAGGCGCA-
--GCGCATGCGCAC
 C T G A A C T G A C T G A G T C C T G A A G T C C G T A A T C G A C T G A G T C C A T G A T G C C G T A A C G T
A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGGCACAGGCGCA-
AGCGGCACACACGCAA
 A C G T A C G T C T G A A C T G A C T G A G T C C T G A A G T C C G T A A T C G A C T G A G T C C A T G A T G C C G T A A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGGCACAGGCGCA
CCAGGAACAG-----
 A C G T A C G T C T G A A C T G A C T G A G T C C T G A A G T C C G T A A T C G A C T G A G T C C A T G A T G C C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGCACAGGCGCA--
AGCAACAGCCGCACC
 C T G A A C T G A C T G A G T C C T G A A G T C C G T A A T C G A C T G A G T C C A T G A T G C C G T A A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGCACAGGCGCA-----
YCAGGCWCAGTACCAGGCTC
 A C G T A C G T C T G A A C T G A C T G A G T C C T G A A G T C C G T A A T C G A C T G A G T C C A T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGGCACAGGCGCA
CAGGCCNNGGCCNN
 A C G T C T G A A C T G A C T G A G T C C T G A A G T C C G T A A T C G A C T G A G T C C A T G A T G C C G T A
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGGCACAGGCGCA
AAGGKGRCGCAGGCA--
 A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C C T G A A G T C C G T A A T C G A C T G A G T C C A T G A T G C C G T A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGCACAGGCGCA
AGCCTCAGGCA--
 C T G A A C T G A C T G A G T C C T G A A G T C C G T A A T C G A C T G A G T C C A T G A T G C C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T