Information for 2-TGAACGCCCA (Motif 4)

A C G T A C T G C T G A G T C A G T A C A T C G A T G C G A T C A G T C T G C A
Reverse Opposite:
A C G T T A C G C T A G T A C G T A G C C A T G C A G T G A C T T G A C T G C A
p-value:1e-11
log p-value:-2.684e+01
Information Content per bp:1.664
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif4.83%
Number of Background Sequences with motif665.9
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets50.0 +/- 27.5bp
Average Position of motif in Background49.0 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGAACGCCCA--
GGACCACCCACG
 A C G T A C T G C T G A G T C A G T A C A T C G A T G C G A T C A G T C T G C A A C G T A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGAACGCCCA----
AAGCATACGCCCAACTT
 A C G T A C G T A C G T A C G T A C T G C T G A G T C A G T A C A T C G A T G C G A T C A G T C T G C A A C G T A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGAACGCCCA----
--YCCGCCCACGCN
 A C G T A C T G C T G A G T C A G T A C A T C G A T G C G A T C A G T C T G C A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGAACGCCCA---
TATCGACCCCCCACAG
 A C G T A C G T A C G T A C G T A C T G C T G A G T C A G T A C A T C G A T G C G A T C A G T C T G C A A C G T A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

EGR2/MA0472.2/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TGAACGCCCA----
---ACGCCCACGCA
 A C G T A C T G C T G A G T C A G T A C A T C G A T G C G A T C A G T C T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

PB0094.1_Zfp128_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGAACGCCCA---
TTNGGGTACGCCNNANN
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A G T C A G T A C A T C G A T G C G A T C A G T C T G C A A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

PB0201.1_Zfp281_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGAACGCCCA-----
AGGAGACCCCCAATTTG
 A C G T A C G T A C G T A C T G C T G A G T C A G T A C A T C G A T G C G A T C A G T C T G C A A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

EGR4/MA0733.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGAACGCCCA-------
-TTACGCCCACGCATTT
 A C G T A C T G C T G A G T C A G T A C A T C G A T G C G A T C A G T C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

GLIS3/MA0737.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGAACGCCCA-----
-GACCCCCCACGAAG
 A C G T A C T G C T G A G T C A G T A C A T C G A T G C G A T C A G T C T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGAACGCCCA
GGAAANCCCC
 A C G T A C T G C T G A G T C A G T A C A T C G A T G C G A T C A G T C T G C A
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C