Information for 9-ATSKRCGAGG (Motif 25)

C G T A A C G T A T G C A C T G C T A G A G T C A C T G C G T A A C T G C T A G
Reverse Opposite:
G A T C A G T C A C G T A G T C C T A G G A T C G T A C A T C G C G T A A C G T
p-value:1e-7
log p-value:-1.730e+01
Information Content per bp:1.813
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif103.0
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets45.1 +/- 24.1bp
Average Position of motif in Background50.4 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATSKRCGAGG---
ANATTTTACGAGNNNN
 A C G T A C G T A C G T C G T A A C G T A T G C A C T G C T A G A G T C A C T G C G T A A C T G C T A G A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATSKRCGAGG
NTTTTACGAGN
 A C G T C G T A A C G T A T G C A C T G C T A G A G T C A C T G C G T A A C T G C T A G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATSKRCGAGG----
NNAGGGACAAGGGCNC
 A C G T A C G T C G T A A C G T A T G C A C T G C T A G A G T C A C T G C G T A A C T G C T A G A C G T A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATSKRCGAGG---
NAATTTTACGAGNTNN
 A C G T A C G T A C G T C G T A A C G T A T G C A C T G C T A G A G T C A C T G C G T A A C T G C T A G A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:-9
Orientation:forward strand
Alignment:---------ATSKRCGAGG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A T G C A C T G C T A G A G T C A C T G C G T A A C T G C T A G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATSKRCGAGG----
NNAGGGGCGGGGTNNA
 A C G T A C G T C G T A A C G T A T G C A C T G C T A G A G T C A C T G C G T A A C T G C T A G A C G T A C G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

Klf12/MA0742.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ATSKRCGAGG--
NANAAGGGCGTGGTC
 A C G T A C G T A C G T C G T A A C G T A T G C A C T G C T A G A G T C A C T G C G T A A C T G C T A G A C G T A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ATSKRCGAGG-----
TTGACCGAGAATTCC
 C G T A A C G T A T G C A C T G C T A G A G T C A C T G C G T A A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ATSKRCGAGG--
GTGGGGGAGGGG
 C G T A A C G T A T G C A C T G C T A G A G T C A C T G C G T A A C T G C T A G A C G T A C G T
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

SP3/MA0746.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ATSKRCGAGG-
GGGGGCGTGGN
 C G T A A C G T A T G C A C T G C T A G A G T C A C T G C G T A A C T G C T A G A C G T
C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C