Information for 14-TGCAGGCTGCCTG (Motif 24)

A C G T T A C G A T G C C G T A A C T G A C T G T A G C G A C T C A T G G T A C G A T C G C A T A C T G
Reverse Opposite:
T A G C C G T A C T A G A C T G G A T C C T G A A T C G A G T C G T A C C G A T A T C G A T G C T G C A
p-value:1e-7
log p-value:-1.755e+01
Information Content per bp:1.749
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif175.3
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets42.9 +/- 27.3bp
Average Position of motif in Background48.3 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGGCTGCCTG
TGGCAGNCTGCCAG
 A C G T A C G T T A C G A T G C C G T A A C T G A C T G T A G C G A C T C A T G G T A C G A T C G C A T A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCAGGCTGCCTG----
-ACATGCTACCTAATAC
 A C G T T A C G A T G C C G T A A C T G A C T G T A G C G A C T C A T G G T A C G A T C G C A T A C T G A C G T A C G T A C G T A C G T
A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TGCAGGCTGCCTG
--TWGTCTGV---
 A C G T T A C G A T G C C G T A A C T G A C T G T A G C G A C T C A T G G T A C G A T C G C A T A C T G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCAGGCTGCCTG
----NGCTN----
 A C G T T A C G A T G C C G T A A C T G A C T G T A G C G A C T C A T G G T A C G A T C G C A T A C T G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TGCAGGCTGCCTG
DCHCAGCAGGRGGCC--
 A C G T A C G T A C G T A C G T A C G T T A C G A T G C C G T A A C T G A C T G T A G C G A C T C A T G G T A C G A T C G C A T A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGCAGGCTGCCTG
ANCAGGATGT---
 A C G T T A C G A T G C C G T A A C T G A C T G T A G C G A C T C A T G G T A C G A T C G C A T A C T G
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TGCAGGCTGCCTG
TTGGCATGGTGCCA-
 A C G T A C G T A C G T T A C G A T G C C G T A A C T G A C T G T A G C G A C T C A T G G T A C G A T C G C A T A C T G
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TGCAGGCTGCCTG-
TTGGCANNNTGCCAAG
 A C G T A C G T A C G T T A C G A T G C C G T A A C T G A C T G T A G C G A C T C A T G G T A C G A T C G C A T A C T G A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------TGCAGGCTGCCTG
AAGGKGRCGCAGGCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T G C C G T A A C T G A C T G T A G C G A C T C A T G G T A C G A T C G C A T A C T G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGCAGGCTGCCTG
TNNGGGCAG----
 A C G T T A C G A T G C C G T A A C T G A C T G T A G C G A C T C A T G G T A C G A T C G C A T A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T