Information for 8-CTGGCCAGCG (Motif 22)

A G T C A C G T A C T G C T A G A G T C A G T C C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T C T A G A C T G A G T C A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.762e+01
Information Content per bp:1.953
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif43.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets55.8 +/- 24.5bp
Average Position of motif in Background47.9 +/- 39.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGGCCAGCG
WDNCTGGGCA---
 A C G T A C G T A C G T A G T C A C G T A C T G C T A G A G T C A G T C C G T A A C T G A G T C A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CTGGCCAGCG
-----CAGCC
 A G T C A C G T A C T G C T A G A G T C A G T C C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGGCCAGCG----
NTGCCCANNGGTNA
 A G T C A C G T A C T G C T A G A G T C A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGGCCAGCG
TTGGCA----
 A G T C A C G T A C T G C T A G A G T C A G T C C G T A A C T G A G T C A C T G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCCAGCG
NTTGGCANN--
 A C G T A G T C A C G T A C T G C T A G A G T C A G T C C G T A A C T G A G T C A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGGCCAGCG
TTGCCAAG--
 A G T C A C G T A C T G C T A G A G T C A G T C C G T A A C T G A G T C A C T G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTGGCCAGCG
GGTCTGGCAT---
 A C G T A C G T A C G T A G T C A C G T A C T G C T A G A G T C A G T C C G T A A C T G A G T C A C T G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGGCCAGCG-
AAGGCAAGTGT
 A G T C A C G T A C T G C T A G A G T C A G T C C G T A A C T G A G T C A C T G A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CTGGCCAGCG----
---GTCAGCANNTN
 A G T C A C G T A C T G C T A G A G T C A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CTGGCCAGCG-
GGGGCTYGKCTGGGA
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C T A G A G T C A G T C C G T A A C T G A G T C A C T G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A