Information for 6-CCTGTCGCCG (Motif 18)

A G T C G T A C A C G T A C T G A G C T A T G C A C T G A T G C A G T C A T C G
Reverse Opposite:
T A G C C T A G A T C G T G A C A T C G T C G A A G T C G T C A A C T G A C T G
p-value:1e-8
log p-value:-1.908e+01
Information Content per bp:1.850
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif284.2
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets48.1 +/- 25.6bp
Average Position of motif in Background48.6 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTGTCGCCG
GCTGTG----
 A G T C G T A C A C G T A C T G A G C T A T G C A C T G A T G C A G T C A T C G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTGTCGCCG
CCTGTCAA--
 A G T C G T A C A C G T A C T G A G C T A T G C A C T G A T G C A G T C A T C G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTGTCGCCG-
-CTGTTCCTGG
 A G T C G T A C A C G T A C T G A G C T A T G C A C T G A T G C A G T C A T C G A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCTGTCGCCG--
SCTGTCARCACC
 A G T C G T A C A C G T A C T G A G C T A T G C A C T G A T G C A G T C A T C G A C G T A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTCGCCG
NCACCTGTN----
 A C G T A C G T A C G T A G T C G T A C A C G T A C T G A G C T A T G C A C T G A T G C A G T C A T C G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTCGCCG
RYHYACCTGB-----
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C T G A G C T A T G C A C T G A T G C A G T C A T C G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCTGTCGCCG
GCTGTCAA--
 A G T C G T A C A C G T A C T G A G C T A T G C A C T G A T G C A G T C A T C G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTCGCCG
ANCCACCTGTTGCNC
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C T G A G C T A T G C A C T G A T G C A G T C A T C G
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCTGTCGCCG
ACTTCCTGTT----
 A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C T G A G C T A T G C A C T G A T G C A G T C A T C G
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTCGCCG
CCACCTGTTGCAT
 A C G T A C G T A C G T A G T C G T A C A C G T A C T G A G C T A T G C A C T G A T G C A G T C A T C G
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T